RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C KKQ8P36004 724 aa3.22□□□□□ -1.89
SQS1YNL224C REG2P38232 338 aa3.22□□□□□ -1.89
SQS1YNL224C MCX1P38323 520 aaPredicted RBP3.22□□□□□ -1.89
SQS1YNL224C MSS4P38994 779 aa3.22□□□□□ -1.89
SQS1YNL224C SEC72P39742 193 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C YEL057CP39983 233 aa3.22□□□□□ -1.89
SQS1YNL224C PRK1P40494 810 aa3.22□□□□□ -1.89
SQS1YNL224C YAR1P46683 200 aa3.22□□□□□ -1.89
SQS1YNL224C HOC1P47124 396 aa3.22□□□□□ -1.89
SQS1YNL224C AZR1P50080 613 aa3.22□□□□□ -1.89
SQS1YNL224C ACS2P52910 683 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C ARI1P53111 347 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C YGR111WP53265 400 aa3.22□□□□□ -1.89
SQS1YNL224C RTT102P53330 157 aa3.22□□□□□ -1.89
SQS1YNL224C CCE1Q03702 353 aa3.22□□□□□ -1.89
SQS1YNL224C OST6Q03723 332 aa3.22□□□□□ -1.89
SQS1YNL224C ATC1Q04005 294 aa3.22□□□□□ -1.89
SQS1YNL224C HLR1Q04429 423 aa3.22□□□□□ -1.89
SQS1YNL224C SOV1Q04748 898 aa3.22□□□□□ -1.89
SQS1YNL224C STE23Q06010 1027 aa3.22□□□□□ -1.89
SQS1YNL224C YPR127WQ06494 345 aa3.22□□□□□ -1.89
SQS1YNL224C FRA1Q07825 749 aa3.22□□□□□ -1.89
SQS1YNL224C YAP7Q08182 245 aa3.22□□□□□ -1.89
SQS1YNL224C YLR053CQ12026 108 aa3.22□□□□□ -1.89
SQS1YNL224C FYV7Q12247 151 aa3.22□□□□□ -1.89
SQS1YNL224C RRP42Q12277 265 aaPredicted RBP3.22□□□□□ -1.89
SQS1YNL224C ATG34Q12292 412 aa3.22□□□□□ -1.89
SQS1YNL224C SPT6P23615 1451 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C SIN3P22579 1536 aa3.22□□□□□ -1.89
SQS1YNL224C RPL25P04456 142 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C SPS4P09937 338 aa3.22□□□□□ -1.89
SQS1YNL224C YMR085WP0CF18 432 aa3.22□□□□□ -1.89
SQS1YNL224C MAS1P10507 462 aa3.22□□□□□ -1.89
SQS1YNL224C SNF3P10870 884 aa3.22□□□□□ -1.89
SQS1YNL224C VBA3P25594 458 aa3.22□□□□□ -1.89
SQS1YNL224C NGG1P32494 702 aa3.22□□□□□ -1.89
SQS1YNL224C MAL32P38158 584 aa3.22□□□□□ -1.89
SQS1YNL224C ERG7P38604 731 aa3.22□□□□□ -1.89
SQS1YNL224C EFM1P38732 585 aa3.22□□□□□ -1.89
SQS1YNL224C SFB3P38810 929 aa3.22□□□□□ -1.89
SQS1YNL224C CCT2P39076 527 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C RFC2P40348 353 aa3.22□□□□□ -1.89
SQS1YNL224C GVP36P40531 326 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C LSB6P42951 607 aa3.22□□□□□ -1.89
SQS1YNL224C ARC1P46672 376 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C UFD1P53044 361 aa3.22□□□□□ -1.89
SQS1YNL224C NQM1P53228 333 aaPredicted RBP3.22□□□□□ -1.89
SQS1YNL224C RSM27P53305 110 aa3.22□□□□□ -1.89
SQS1YNL224C MAL12P53341 584 aa3.22□□□□□ -1.89
SQS1YNL224C CWC27Q02770 301 aa3.22□□□□□ -1.89
SQS1YNL224C ARL3Q02804 198 aa3.22□□□□□ -1.89
SQS1YNL224C FRK1Q03002 865 aaPredicted RBP3.22□□□□□ -1.89
SQS1YNL224C EFR3Q03653 782 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C VTA1Q06263 330 aa3.22□□□□□ -1.89
SQS1YNL224C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SQS1YNL224C SFG1Q12507 346 aa3.22□□□□□ -1.89
SQS1YNL224C VCX1Q99385 411 aa3.22□□□□□ -1.89
SQS1YNL224C SIR4P11978 1358 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-LR1P0C2J3 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-FP0CX63 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-GR2P0CX64 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-CP25384 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-DR2Q03494 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY1B-DR1Q03855 1755 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-DR3Q07791 1770 aaKnown RBP3.22□□□□□ -1.89
SQS1YNL224C TY2B-OR1Q12113 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-DR1Q12472 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-BQ12491 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY2B-OR2Q12501 1770 aa3.22□□□□□ -1.89
SQS1YNL224C TY1B-DR3Q99231 1755 aa3.22□□□□□ -1.89
SQS1YNL224C YLR278CQ05854 1341 aa3.21□□□□□ -1.89
SQS1YNL224C TDH2P00358 332 aaKnown RBP3.21□□□□□ -1.89
SQS1YNL224C TDH3P00359 332 aaKnown RBP RIP-Chip data3.21□□□□□ -1.89not detected
SQS1YNL224C TRP4P07285 380 aaPredicted RBP3.21□□□□□ -1.89
SQS1YNL224C FUM1P08417 488 aaKnown RBP3.21□□□□□ -1.89
SQS1YNL224C SPE1P08432 466 aa3.21□□□□□ -1.89
SQS1YNL224C HEM13P11353 328 aaKnown RBP3.21□□□□□ -1.89
SQS1YNL224C MDH1P17505 334 aaKnown RBP RIP-Chip data3.21□□□□□ -1.89not detected
SQS1YNL224C MET16P18408 261 aaPredicted RBP3.21□□□□□ -1.89
SQS1YNL224C MIR1P23641 311 aaKnown RBP3.21□□□□□ -1.89
SQS1YNL224C RNA15P25299 296 aaPredicted RBP3.21□□□□□ -1.89
SQS1YNL224C PBN1P25580 416 aa3.21□□□□□ -1.89
SQS1YNL224C CYS3P31373 394 aaKnown RBP3.21□□□□□ -1.89
SQS1YNL224C ACH1P32316 526 aa3.21□□□□□ -1.89
SQS1YNL224C SAC6P32599 642 aaKnown RBP3.21□□□□□ -1.89
SQS1YNL224C SKG1P36169 355 aa3.21□□□□□ -1.89
SQS1YNL224C SPC97P38863 823 aa3.21□□□□□ -1.89
SQS1YNL224C AIM46P38885 310 aa3.21□□□□□ -1.89
SQS1YNL224C ERG28P40030 148 aa3.21□□□□□ -1.89
SQS1YNL224C GDS1P41913 522 aa3.21□□□□□ -1.89
SQS1YNL224C PMT6P42934 759 aa3.21□□□□□ -1.89
SQS1YNL224C YGR201CP42936 225 aa3.21□□□□□ -1.89
SQS1YNL224C YJL132WP47014 750 aa3.21□□□□□ -1.89
SQS1YNL224C ALY2P47029 1046 aa3.21□□□□□ -1.89
SQS1YNL224C YJR030CP47101 745 aa3.21□□□□□ -1.89
SQS1YNL224C NBP1P52919 319 aaPredicted RBP3.21□□□□□ -1.89
SQS1YNL224C YGL036WP53185 909 aaPredicted RBP3.21□□□□□ -1.89
SQS1YNL224C ISU1Q03020 165 aa3.21□□□□□ -1.89
SQS1YNL224C YMR209CQ03648 457 aa3.21□□□□□ -1.89
SQS1YNL224C YDR249CQ03787 373 aa3.21□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms