RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	GPI16	P38875	610 aa		4.28	□□□□□ -1.72
APC1	YNL172W	ALK1	P43633	760 aa	Known RBP	4.28	□□□□□ -1.72
APC1	YNL172W	ATG36	P46983	293 aa		4.28	□□□□□ -1.72
APC1	YNL172W	LSG1	P53145	640 aa	Known RBP	4.28	□□□□□ -1.72
APC1	YNL172W	VHS1	Q03785	461 aa		4.28	□□□□□ -1.72
APC1	YNL172W	BSC2	Q05611	235 aa		4.28	□□□□□ -1.72
APC1	YNL172W	UTP21	Q06078	939 aa	Predicted RBP	4.28	□□□□□ -1.72
APC1	YNL172W	YOL159C	Q08300	171 aa		4.28	□□□□□ -1.72
APC1	YNL172W	ADF1	Q2V2Q1	113 aa		4.28	□□□□□ -1.72
APC1	YNL172W	YSF3	P0C074	85 aa	Predicted RBP	4.28	□□□□□ -1.72
APC1	YNL172W	FUR1	P18562	216 aa	Known RBP	4.28	□□□□□ -1.72
APC1	YNL172W	PPH21	P23594	369 aa		4.28	□□□□□ -1.72
APC1	YNL172W	RPC82	P32349	654 aa		4.28	□□□□□ -1.72
APC1	YNL172W	AEP1	P32493	518 aa		4.28	□□□□□ -1.72
APC1	YNL172W	YHL008C	P38750	627 aa		4.28	□□□□□ -1.72
APC1	YNL172W	OSH7	P38755	437 aa		4.28	□□□□□ -1.72
APC1	YNL172W	SEC27	P41811	889 aa	Known RBP	4.28	□□□□□ -1.72
APC1	YNL172W	TSA2	Q04120	196 aa		4.28	□□□□□ -1.72
APC1	YNL172W	NMD4	Q12129	218 aa		4.28	□□□□□ -1.72
APC1	YNL172W	DAP2	P18962	818 aa		4.28	□□□□□ -1.73
APC1	YNL172W	AMS1	P22855	1083 aa		4.28	□□□□□ -1.73
APC1	YNL172W	TSR4	P25040	408 aa		4.28	□□□□□ -1.73
APC1	YNL172W	DMC1	P25453	334 aa		4.28	□□□□□ -1.73
APC1	YNL172W	TPO5	P36029	618 aa		4.28	□□□□□ -1.73
APC1	YNL172W	INM1	P38710	295 aa		4.28	□□□□□ -1.73
APC1	YNL172W	XBP1	P40489	647 aa		4.28	□□□□□ -1.73
APC1	YNL172W	TIM13	P53299	105 aa		4.28	□□□□□ -1.73
APC1	YNL172W	BCP1	Q06338	283 aa		4.28	□□□□□ -1.73
APC1	YNL172W	MRP13	P12686	339 aa		4.27	□□□□□ -1.73
APC1	YNL172W	UGA1	P17649	471 aa		4.27	□□□□□ -1.73
APC1	YNL172W	RML2	P32611	393 aa		4.27	□□□□□ -1.73
APC1	YNL172W	GDH2	P33327	1092 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	LOT5	P34234	306 aa		4.27	□□□□□ -1.73
APC1	YNL172W	ASK1	P35734	292 aa		4.27	□□□□□ -1.73
APC1	YNL172W	CHK1	P38147	527 aa		4.27	□□□□□ -1.73
APC1	YNL172W	ASN2	P49090	572 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	NSL1	Q12143	216 aa		4.27	□□□□□ -1.73
APC1	YNL172W	VCX1	Q99385	411 aa		4.27	□□□□□ -1.73
APC1	YNL172W	CBS1	P14066	229 aa		4.27	□□□□□ -1.73
APC1	YNL172W	ARO3	P14843	370 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	CLB4	P24871	460 aa		4.27	□□□□□ -1.73
APC1	YNL172W	NUP2	P32499	720 aa		4.27	□□□□□ -1.73
APC1	YNL172W	FAA2	P39518	744 aa		4.27	□□□□□ -1.73
APC1	YNL172W	THO1	P40040	218 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	HOS4	P40480	1083 aa		4.27	□□□□□ -1.73
APC1	YNL172W	RRT5	P43607	289 aa		4.27	□□□□□ -1.73
APC1	YNL172W	MDV1	P47025	714 aa		4.27	□□□□□ -1.73
APC1	YNL172W	LCL3	P53153	274 aa		4.27	□□□□□ -1.73
APC1	YNL172W	FAL1	Q12099	399 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	YOR097C	Q12274	175 aa	Predicted RBP	4.27	□□□□□ -1.73
APC1	YNL172W	SAS5	Q99314	248 aa		4.27	□□□□□ -1.73
APC1	YNL172W	HSF1	P10961	833 aa		4.27	□□□□□ -1.73
APC1	YNL172W	PEX18	P38855	283 aa		4.27	□□□□□ -1.73
APC1	YNL172W	YIL166C	P40445	542 aa		4.27	□□□□□ -1.73
APC1	YNL172W	IKS1	P47042	667 aa		4.27	□□□□□ -1.73
APC1	YNL172W	LYS5	P50113	272 aa		4.27	□□□□□ -1.73
APC1	YNL172W	PBP1	P53297	722 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	STE23	Q06010	1027 aa		4.27	□□□□□ -1.73
APC1	YNL172W	ERP4	Q12450	207 aa		4.27	□□□□□ -1.73
APC1	YNL172W	NAG1	Q8TGN9	163 aa		4.27	□□□□□ -1.73
APC1	YNL172W	NAM9	P27929	486 aa		4.27	□□□□□ -1.73
APC1	YNL172W	TSL1	P38427	1098 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	BIG1	P38813	335 aa		4.27	□□□□□ -1.73
APC1	YNL172W	YHB1	P39676	399 aa	Known RBP	4.27	□□□□□ -1.73
APC1	YNL172W	YIP4	P53093	235 aa		4.27	□□□□□ -1.73
APC1	YNL172W	LUC7	Q07508	261 aa	Predicted RBP	4.27	□□□□□ -1.73
APC1	YNL172W	YDL218W	Q07629	317 aa		4.27	□□□□□ -1.73
APC1	YNL172W	TEN1	Q07921	160 aa		4.27	□□□□□ -1.73
APC1	YNL172W	NDD1	Q08887	554 aa		4.27	□□□□□ -1.73
APC1	YNL172W	BAG7	Q12128	409 aa		4.27	□□□□□ -1.73
APC1	YNL172W	POL4	P25615	582 aa		4.26	□□□□□ -1.73
APC1	YNL172W	TRK2	P28584	889 aa		4.26	□□□□□ -1.73
APC1	YNL172W	ADO1	P47143	340 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	IPI3	P53877	555 aa		4.26	□□□□□ -1.73
APC1	YNL172W	FAP1	P53971	965 aa		4.26	□□□□□ -1.73
APC1	YNL172W	PEX25	Q02969	394 aa		4.26	□□□□□ -1.73
APC1	YNL172W	MUS81	Q04149	632 aa	Predicted RBP	4.26	□□□□□ -1.73
APC1	YNL172W	VTI1	Q04338	217 aa		4.26	□□□□□ -1.73
APC1	YNL172W	GSH2	Q08220	491 aa		4.26	□□□□□ -1.73
APC1	YNL172W	YEL077C	Q3E7X8	1277 aa		4.26	□□□□□ -1.73
APC1	YNL172W	KIN2	P13186	1147 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	NUP1	P20676	1076 aa		4.26	□□□□□ -1.73
APC1	YNL172W	SBA1	P28707	216 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	PMT2	P31382	759 aa		4.26	□□□□□ -1.73
APC1	YNL172W	LOS1	P33418	1100 aa	Predicted RBP	4.26	□□□□□ -1.73
APC1	YNL172W	FZO1	P38297	855 aa		4.26	□□□□□ -1.73
APC1	YNL172W	YIR007W	P40566	764 aa		4.26	□□□□□ -1.73
APC1	YNL172W	VNX1	P42839	908 aa		4.26	□□□□□ -1.73
APC1	YNL172W	RAS2	P01120	322 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	PET111	P08468	800 aa		4.26	□□□□□ -1.73
APC1	YNL172W	RPS4A	P0CX35	261 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	RPS4B	P0CX36	261 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	CLN1	P20437	546 aa		4.26	□□□□□ -1.73
APC1	YNL172W	TRR2	P38816	342 aa		4.26	□□□□□ -1.73
APC1	YNL172W	RGA1	P39083	1007 aa		4.26	□□□□□ -1.73
APC1	YNL172W	COG3	P40094	801 aa		4.26	□□□□□ -1.73
APC1	YNL172W	SLZ1	P40167	298 aa		4.26	□□□□□ -1.73
APC1	YNL172W	GCN20	P43535	752 aa	Known RBP	4.26	□□□□□ -1.73
APC1	YNL172W	SCS3	P53012	380 aa		4.26	□□□□□ -1.73
APC1	YNL172W	MRX10	Q05648	414 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms