RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C BMT2P38278 337 aa2.77□□□□□ -1.97
VPS20YMR077C MST28P39552 234 aa2.77□□□□□ -1.97
VPS20YMR077C ERP2P39704 215 aa2.77□□□□□ -1.97
VPS20YMR077C UTP18P40362 594 aaPredicted RBP2.77□□□□□ -1.97
VPS20YMR077C IPI3P53877 555 aa2.77□□□□□ -1.97
VPS20YMR077C YSA1Q01976 231 aa2.77□□□□□ -1.97
VPS20YMR077C ECM11Q04110 302 aa2.77□□□□□ -1.97
VPS20YMR077C COR1P07256 457 aa2.76□□□□□ -1.97
VPS20YMR077C KAR3P17119 729 aa2.76□□□□□ -1.97
VPS20YMR077C CBP4P37267 147 aa2.76□□□□□ -1.97
VPS20YMR077C YBL029WP38201 376 aa2.76□□□□□ -1.97
VPS20YMR077C MBB1P39534 108 aa2.76□□□□□ -1.97
VPS20YMR077C POP1P41812 875 aa2.76□□□□□ -1.97
VPS20YMR077C VID30P53076 958 aa2.76□□□□□ -1.97
VPS20YMR077C RPC11Q04307 110 aaPredicted RBP2.76□□□□□ -1.97
VPS20YMR077C YPQ1Q12010 308 aa2.76□□□□□ -1.97
VPS20YMR077C TRS85P46944 698 aa2.75□□□□□ -1.97
VPS20YMR077C PDS5Q04264 1277 aa2.75□□□□□ -1.97
VPS20YMR077C SOV1Q04748 898 aa2.75□□□□□ -1.97
VPS20YMR077C POL4P25615 582 aa2.74□□□□□ -1.97
VPS20YMR077C ARA1P38115 344 aa2.74□□□□□ -1.97
VPS20YMR077C SYG1P40528 902 aa2.74□□□□□ -1.97
VPS20YMR077C LAM5P43560 674 aa2.74□□□□□ -1.97
VPS20YMR077C HXT11P54862 567 aa2.74□□□□□ -1.97
VPS20YMR077C YMR181CQ03231 154 aa2.74□□□□□ -1.97
VPS20YMR077C RAV1P47104 1357 aa2.74□□□□□ -1.97
VPS20YMR077C TRP1P00912 224 aa2.73□□□□□ -1.97
VPS20YMR077C POP5P28005 173 aa2.73□□□□□ -1.97
VPS20YMR077C CCT6P39079 546 aa2.73□□□□□ -1.97
VPS20YMR077C CHS6P40955 746 aa2.73□□□□□ -1.97
VPS20YMR077C YKU80Q04437 629 aa2.73□□□□□ -1.97
VPS20YMR077C YPR091CQ06833 770 aa2.73□□□□□ -1.97
VPS20YMR077C SSP2Q08646 371 aa2.73□□□□□ -1.97
VPS20YMR077C RPL19AP0CX82 189 aaKnown RBP2.72□□□□□ -1.97
VPS20YMR077C RPL19BP0CX83 189 aaPredicted RBP2.72□□□□□ -1.97
VPS20YMR077C EST1P17214 699 aaPredicted RBP2.72□□□□□ -1.97
VPS20YMR077C NPL6P32832 435 aa2.72□□□□□ -1.97
VPS20YMR077C RRN3P36070 627 aa2.72□□□□□ -1.97
VPS20YMR077C MRPS9P38120 278 aa2.72□□□□□ -1.97
VPS20YMR077C SEO1P39709 593 aa2.72□□□□□ -1.97
VPS20YMR077C FIN1Q03898 291 aa2.72□□□□□ -1.97
VPS20YMR077C PPM1Q04081 328 aa2.72□□□□□ -1.97
VPS20YMR077C PKH2Q12236 1081 aaKnown RBP2.72□□□□□ -1.97
VPS20YMR077C YPS3Q12303 508 aa2.72□□□□□ -1.97
VPS20YMR077C YCK1P23291 538 aa2.71□□□□□ -1.98
VPS20YMR077C MUM2P38236 366 aa2.71□□□□□ -1.98
VPS20YMR077C LCL3P53153 274 aa2.71□□□□□ -1.98
VPS20YMR077C AIM32Q04689 311 aa2.71□□□□□ -1.98
VPS20YMR077C MFB1Q04922 465 aa2.71□□□□□ -1.98
VPS20YMR077C MRD1Q06106 887 aaKnown RBP2.71□□□□□ -1.98
VPS20YMR077C TIP1P27654 210 aaPredicted RBP2.7□□□□□ -1.98
VPS20YMR077C MRS6P32864 603 aaKnown RBP2.7□□□□□ -1.98
VPS20YMR077C AIM10P39965 576 aaKnown RBP2.7□□□□□ -1.98
VPS20YMR077C IMD4P50094 524 aaKnown RBP2.7□□□□□ -1.98
VPS20YMR077C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
VPS20YMR077C YCR041WP37265 110 aa2.69□□□□□ -1.98
VPS20YMR077C YHR131CP38835 850 aa2.69□□□□□ -1.98
VPS20YMR077C DPH1P40487 425 aaKnown RBP2.69□□□□□ -1.98
VPS20YMR077C DFG10P40526 253 aa2.69□□□□□ -1.98
VPS20YMR077C SLG1P54867 378 aa2.69□□□□□ -1.98
VPS20YMR077C YEH1Q07804 573 aa2.69□□□□□ -1.98
VPS20YMR077C TIM18Q08749 192 aa2.69□□□□□ -1.98
VPS20YMR077C NOP58Q12499 511 aaKnown RBP2.69□□□□□ -1.98
VPS20YMR077C CHS3P29465 1165 aa2.68□□□□□ -1.98
VPS20YMR077C KAR9P32526 644 aa2.68□□□□□ -1.98
VPS20YMR077C YDR239CQ03780 787 aa2.68□□□□□ -1.98
VPS20YMR077C PLP2Q12017 286 aa2.68□□□□□ -1.98
VPS20YMR077C YPT6Q99260 215 aa2.68□□□□□ -1.98
VPS20YMR077C PSK1P31374 1356 aa2.67□□□□□ -1.98
VPS20YMR077C TCD2P36101 447 aaKnown RBP2.67□□□□□ -1.98
VPS20YMR077C SSU1P41930 458 aa2.67□□□□□ -1.98
VPS20YMR077C OCA1P50946 238 aaPredicted RBP2.67□□□□□ -1.98
VPS20YMR077C YIP1P53039 248 aa2.67□□□□□ -1.98
VPS20YMR077C VPS38Q05919 439 aa2.67□□□□□ -1.98
VPS20YMR077C CTI6Q08923 506 aa2.67□□□□□ -1.98
VPS20YMR077C PEP3P27801 918 aa2.66□□□□□ -1.98
VPS20YMR077C MUD1P32605 298 aaKnown RBP2.66□□□□□ -1.98
VPS20YMR077C REG2P38232 338 aa2.66□□□□□ -1.98
VPS20YMR077C PCP1P53259 346 aa2.66□□□□□ -1.98
VPS20YMR077C NCS2P53923 493 aaPredicted RBP2.66□□□□□ -1.98
VPS20YMR077C RLM1Q12224 676 aa2.66□□□□□ -1.98
VPS20YMR077C PRM7Q12459 698 aa2.66□□□□□ -1.98
VPS20YMR077C RRD2Q12461 358 aa2.66□□□□□ -1.98
VPS20YMR077C YBR126W-AQ8TGU7 68 aa2.66□□□□□ -1.98
VPS20YMR077C PRD1P25375 712 aa2.65□□□□□ -1.99
VPS20YMR077C GYP6P32806 458 aa2.65□□□□□ -1.99
VPS20YMR077C TIM17P39515 158 aa2.65□□□□□ -1.99
VPS20YMR077C SNX3Q08826 162 aaKnown RBP2.65□□□□□ -1.99
VPS20YMR077C TOP1P04786 769 aa2.64□□□□□ -1.99
VPS20YMR077C CYC3P06182 269 aa2.64□□□□□ -1.99
VPS20YMR077C YBR137WP38276 179 aa2.64□□□□□ -1.99
VPS20YMR077C YMR147WP40218 223 aaKnown RBP2.64□□□□□ -1.99
VPS20YMR077C MKC7P53379 596 aa2.64□□□□□ -1.99
VPS20YMR077C SLY1P22213 666 aa2.63□□□□□ -1.99
VPS20YMR077C SNT1P25357 1226 aa2.63□□□□□ -1.99
VPS20YMR077C CSE2P33308 149 aa2.63□□□□□ -1.99
VPS20YMR077C MIG3P39943 394 aa2.63□□□□□ -1.99
VPS20YMR077C NMD4Q12129 218 aa2.63□□□□□ -1.99
VPS20YMR077C HUA2Q12134 243 aa2.63□□□□□ -1.99
VPS20YMR077C SPT10P35208 640 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms