RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	PET9	P18239	318 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	ARE1	P25628	610 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	CSM1	P25651	190 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	FIG2	P25653	1609 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	COQ8	P27697	501 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	PEX3	P28795	441 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	HEM12	P32347	362 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	RPT3	P33298	428 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	RPF2	P36160	344 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	SHM2	P37291	469 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	YBR287W	P38355	427 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	PRS2	P38620	318 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	AXL2	P38928	823 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	YFL052W	P43551	465 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	JHD2	P47156	728 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	TAF6	P53040	516 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	LSC2	P53312	427 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	EFR3	Q03653	782 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	VHS1	Q03785	461 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	ARX1	Q03862	593 aa	Known RBP	4.9	□□□□□ -1.63
SEC39	YLR440C	VID22	Q05934	901 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	STE23	Q06010	1027 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	GPN3	Q06543	272 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	FMP25	Q08023	583 aa		4.9	□□□□□ -1.63
SEC39	YLR440C	AI2	P03876	854 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	ERG20	P08524	352 aa	Known RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	SBP1	P10080	294 aa	Known RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	MAS1	P10507	462 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	CBS2	P14905	389 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	RPO26	P20435	155 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	IME1	P21190	360 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	MKK2	P32491	506 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	PRP21	P32524	280 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	MNS1	P32906	549 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	YKL070W	P36087	169 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	HSL7	P38274	827 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	YHL008C	P38750	627 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	YJL206C	P39529	758 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	SAD1	P43589	448 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	NBP1	P52919	319 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	SCY1	P53009	804 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	UFD1	P53044	361 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	IMP4	P53941	290 aa	Known RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	PRP38	Q00723	242 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	ARL3	Q02804	198 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	ROD1	Q02805	837 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	ELP3	Q02908	557 aa	Known RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	YDR444W	Q04093	687 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	YMR027W	Q04371	470 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	CDD1	Q06549	142 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	RRP40	Q08285	240 aa	Known RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	YTM1	Q12024	460 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC39	YLR440C	MLH3	Q12083	715 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	SUL2	Q12325	893 aa		4.89	□□□□□ -1.63
SEC39	YLR440C	ARG4	P04076	463 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	CMD1	P06787	147 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	SLY1	P22213	666 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	PEP3	P27801	918 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	LAC1	P28496	418 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	FAA1	P30624	700 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	PMT2	P31382	759 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	NDI1	P32340	513 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	TFC1	P32367	649 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	OAF3	P36023	863 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	BET3	P36149	193 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	AGP2	P38090	596 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	MAL33	P38157	468 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	BIT2	P38346	545 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	NVJ1	P38881	321 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	AIM18	P38884	321 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	CCT2	P39076	527 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	PRM2	P40534	656 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	MET28	P40573	187 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	SSU1	P41930	458 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	SET4	P42948	560 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	YFR018C	P43599	363 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	YJL132W	P47014	750 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	BIO3	P50277	480 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	NBP35	P52920	328 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	MET13	P53128	600 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	YGR066C	P53242	292 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	CPR6	P53691	371 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	UTP6	Q02354	440 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	TRM44	Q02648	567 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	MSC2	Q03455	724 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	EBS1	Q03466	884 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	YMR210W	Q03649	449 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	HED1	Q03937	162 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	CDC123	Q05791	360 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	ECM22	Q05958	814 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	CTS2	Q06350	511 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	CUR1	Q06469	252 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	PUN1	Q06991	263 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	GSH2	Q08220	491 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	ZEO1	Q08245	113 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	OXR1	Q08952	273 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	BAG7	Q12128	409 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	RMP1	Q12530	201 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	FAS2	P19097	1887 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	PRC1	P00729	532 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms