RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W THI2P38141 450 aa3.2□□□□□ -1.9
VPS38YLR360W MET18P40469 1032 aa3.2□□□□□ -1.9
VPS38YLR360W POP6P53218 158 aa3.2□□□□□ -1.9
VPS38YLR360W OGG1P53397 376 aaPredicted RBP3.2□□□□□ -1.9
VPS38YLR360W ARK1P53974 638 aa3.2□□□□□ -1.9
VPS38YLR360W SUB1P54000 292 aaKnown RBP3.2□□□□□ -1.9
VPS38YLR360W RHO2P06781 192 aa3.19□□□□□ -1.9
VPS38YLR360W CHS1P08004 1131 aa3.19□□□□□ -1.9
VPS38YLR360W CRM1P30822 1084 aaKnown RBP3.19□□□□□ -1.9
VPS38YLR360W NDT80P38830 627 aa3.19□□□□□ -1.9
VPS38YLR360W NDE1P40215 560 aa3.19□□□□□ -1.9
VPS38YLR360W YIL067CP40514 678 aa3.19□□□□□ -1.9
VPS38YLR360W YGL242CP53066 181 aa3.19□□□□□ -1.9
VPS38YLR360W RMD9P53140 646 aaKnown RBP3.19□□□□□ -1.9
VPS38YLR360W ART5P53244 586 aaKnown RBP3.19□□□□□ -1.9
VPS38YLR360W GOR1P53839 350 aa3.19□□□□□ -1.9
VPS38YLR360W MRPL19P53875 158 aa3.19□□□□□ -1.9
VPS38YLR360W PNG1Q02890 363 aa3.19□□□□□ -1.9
VPS38YLR360W TAP42Q04372 366 aa3.19□□□□□ -1.9
VPS38YLR360W SOV1Q04748 898 aa3.19□□□□□ -1.9
VPS38YLR360W YOR387CQ08910 206 aa3.19□□□□□ -1.9
VPS38YLR360W REV1P12689 985 aa3.19□□□□□ -1.9
VPS38YLR360W HEM15P16622 393 aa3.19□□□□□ -1.9
VPS38YLR360W SEC66P33754 206 aa3.19□□□□□ -1.9
VPS38YLR360W JJJ1P53863 590 aa3.19□□□□□ -1.9
VPS38YLR360W YPL199CQ08954 240 aa3.19□□□□□ -1.9
VPS38YLR360W THP3Q12049 470 aaKnown RBP3.19□□□□□ -1.9
VPS38YLR360W SAM1P10659 382 aaKnown RBP3.18□□□□□ -1.9
VPS38YLR360W RPL3P14126 387 aaKnown RBP3.18□□□□□ -1.9
VPS38YLR360W CKA1P15790 372 aa3.18□□□□□ -1.9
VPS38YLR360W SAM2P19358 384 aaKnown RBP3.18□□□□□ -1.9
VPS38YLR360W PPH22P23595 377 aa3.18□□□□□ -1.9
VPS38YLR360W REC114P32841 428 aa3.18□□□□□ -1.9
VPS38YLR360W YBL059WP34224 193 aa3.18□□□□□ -1.9
VPS38YLR360W SWH1P35845 1188 aa3.18□□□□□ -1.9
VPS38YLR360W UTP9P38882 575 aaKnown RBP3.18□□□□□ -1.9
VPS38YLR360W SMF1P38925 575 aa3.18□□□□□ -1.9
VPS38YLR360W RRT5P43607 289 aa3.18□□□□□ -1.9
VPS38YLR360W IRC6P43615 237 aa3.18□□□□□ -1.9
VPS38YLR360W PCP1P53259 346 aa3.18□□□□□ -1.9
VPS38YLR360W NCS2P53923 493 aaPredicted RBP3.18□□□□□ -1.9
VPS38YLR360W ODC1Q03028 310 aa3.18□□□□□ -1.9
VPS38YLR360W RQC1Q05468 723 aaKnown RBP3.18□□□□□ -1.9
VPS38YLR360W TSR2Q06672 205 aaKnown RBP3.18□□□□□ -1.9
VPS38YLR360W NAM9P27929 486 aa3.17□□□□□ -1.9
VPS38YLR360W PAD1P33751 242 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
VPS38YLR360W YCR041WP37265 110 aa3.17□□□□□ -1.9
VPS38YLR360W OTU2P38747 307 aaKnown RBP3.17□□□□□ -1.9
VPS38YLR360W ESL1P40456 1118 aa3.17□□□□□ -1.9
VPS38YLR360W TRS85P46944 698 aa3.17□□□□□ -1.9
VPS38YLR360W DSL1P53847 754 aa3.17□□□□□ -1.9
VPS38YLR360W KTR5P53966 522 aaPredicted RBP3.17□□□□□ -1.9
VPS38YLR360W YDR387CQ04162 555 aa3.17□□□□□ -1.9
VPS38YLR360W SMA2Q04658 369 aa3.17□□□□□ -1.9
VPS38YLR360W RRN11Q04712 507 aa3.17□□□□□ -1.9
VPS38YLR360W PBA1Q05778 276 aa3.17□□□□□ -1.9
VPS38YLR360W MUM3Q08750 479 aa3.17□□□□□ -1.9
VPS38YLR360W GRX6Q12438 231 aa3.17□□□□□ -1.9
VPS38YLR360W RRD2Q12461 358 aa3.17□□□□□ -1.9
VPS38YLR360W HHF1P02309 103 aaKnown RBP3.16□□□□□ -1.9
VPS38YLR360W SPS4P09937 338 aa3.16□□□□□ -1.9
VPS38YLR360W SPT15P13393 240 aaKnown RBP3.16□□□□□ -1.9
VPS38YLR360W ROX1P25042 368 aa3.16□□□□□ -1.9
VPS38YLR360W CPR4P25334 318 aa3.16□□□□□ -1.9
VPS38YLR360W RPN12P32496 274 aa3.16□□□□□ -1.9
VPS38YLR360W GYP6P32806 458 aa3.16□□□□□ -1.9
VPS38YLR360W WWM1P43582 211 aaKnown RBP3.16□□□□□ -1.9
VPS38YLR360W VTC2P43585 828 aa3.16□□□□□ -1.9
VPS38YLR360W YIP1P53039 248 aa3.16□□□□□ -1.9
VPS38YLR360W YIF1P53845 314 aaKnown RBP3.16□□□□□ -1.9
VPS38YLR360W ELP3Q02908 557 aaKnown RBP3.16□□□□□ -1.9
VPS38YLR360W ESA1Q08649 445 aa3.16□□□□□ -1.9
VPS38YLR360W YLR108CQ12259 485 aa3.16□□□□□ -1.9
VPS38YLR360W INH1P01097 85 aa3.15□□□□□ -1.91
VPS38YLR360W NIP100P33420 868 aa3.15□□□□□ -1.91
VPS38YLR360W RFS1P38234 210 aaKnown RBP3.15□□□□□ -1.91
VPS38YLR360W OST1P41543 476 aaKnown RBP3.15□□□□□ -1.91
VPS38YLR360W IBD2P53892 351 aa3.15□□□□□ -1.91
VPS38YLR360W GIR2Q03768 265 aaPredicted RBP3.15□□□□□ -1.91
VPS38YLR360W HSP31Q04432 237 aa3.15□□□□□ -1.91
VPS38YLR360W HEL2Q05580 639 aaKnown RBP3.15□□□□□ -1.91
VPS38YLR360W COG4Q06096 861 aa3.15□□□□□ -1.91
VPS38YLR360W YLR278CQ05854 1341 aa3.14□□□□□ -1.91
VPS38YLR360W RED1P14291 827 aa3.14□□□□□ -1.91
VPS38YLR360W RPI1P23250 407 aaKnown RBP3.14□□□□□ -1.91
VPS38YLR360W YIM1P28625 365 aa3.14□□□□□ -1.91
VPS38YLR360W APE2P32454 952 aaKnown RBP3.14□□□□□ -1.91
VPS38YLR360W HXT3P32466 567 aaKnown RBP3.14□□□□□ -1.91
VPS38YLR360W PRP21P32524 280 aaPredicted RBP3.14□□□□□ -1.91
VPS38YLR360W RIB5P38145 238 aa3.14□□□□□ -1.91
VPS38YLR360W VHC1P38329 1120 aa3.14□□□□□ -1.91
VPS38YLR360W TFG2P41896 400 aaPredicted RBP3.14□□□□□ -1.91
VPS38YLR360W MNP1P53163 194 aaPredicted RBP3.14□□□□□ -1.91
VPS38YLR360W TSR1Q07381 788 aaKnown RBP3.14□□□□□ -1.91
VPS38YLR360W SIL1Q08199 421 aa3.14□□□□□ -1.91
VPS38YLR360W RRP12Q12754 1228 aaKnown RBP3.14□□□□□ -1.91
VPS38YLR360W CCT2P39076 527 aaKnown RBP3.13□□□□□ -1.91
VPS38YLR360W VMA13P41807 478 aaKnown RBP3.13□□□□□ -1.91
VPS38YLR360W LAM5P43560 674 aa3.13□□□□□ -1.91
VPS38YLR360W NCA3P46955 337 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms