RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W THP3Q12049 470 aaKnown RBP3.42□□□□□ -1.86
SMD2YLR275W YCR100CP25606 316 aa3.41□□□□□ -1.86
SMD2YLR275W YEL045CP32616 141 aa3.41□□□□□ -1.86
SMD2YLR275W PRE5P40302 234 aaKnown RBP3.41□□□□□ -1.86
SMD2YLR275W YGR210CP42942 411 aa3.41□□□□□ -1.86
SMD2YLR275W YGL108CP53139 140 aa3.41□□□□□ -1.86
SMD2YLR275W RPT6Q01939 405 aaKnown RBP3.41□□□□□ -1.86
SMD2YLR275W SOV1Q04748 898 aa3.41□□□□□ -1.86
SMD2YLR275W TOP1P04786 769 aa3.4□□□□□ -1.87
SMD2YLR275W YAR066WP0CX18 203 aa3.4□□□□□ -1.87
SMD2YLR275W YHR214WP0CX19 203 aa3.4□□□□□ -1.87
SMD2YLR275W YIM1P28625 365 aa3.4□□□□□ -1.87
SMD2YLR275W SPO22P40511 975 aa3.4□□□□□ -1.87
SMD2YLR275W IBD2P53892 351 aa3.4□□□□□ -1.87
SMD2YLR275W PNG1Q02890 363 aa3.4□□□□□ -1.87
SMD2YLR275W ODC1Q03028 310 aa3.4□□□□□ -1.87
SMD2YLR275W PAL1Q05518 499 aaKnown RBP3.4□□□□□ -1.87
SMD2YLR275W MRD1Q06106 887 aaKnown RBP3.4□□□□□ -1.87
SMD2YLR275W CPR4P25334 318 aa3.39□□□□□ -1.87
SMD2YLR275W CMC1P36064 111 aa3.39□□□□□ -1.87
SMD2YLR275W TAP42Q04372 366 aa3.39□□□□□ -1.87
SMD2YLR275W YPL199CQ08954 240 aa3.39□□□□□ -1.87
SMD2YLR275W ATG29Q12092 213 aa3.39□□□□□ -1.87
SMD2YLR275W TMS1Q12116 473 aa3.39□□□□□ -1.87
SMD2YLR275W YML133CQ03099 1374 aa3.38□□□□□ -1.87
SMD2YLR275W YLL067CQ07888 1374 aa3.38□□□□□ -1.87
SMD2YLR275W YLL066CQ99208 1374 aa3.38□□□□□ -1.87
SMD2YLR275W SUP35P05453 685 aaKnown RBP3.38□□□□□ -1.87
SMD2YLR275W ARO2P28777 376 aaKnown RBP3.38□□□□□ -1.87
SMD2YLR275W SEC66P33754 206 aa3.38□□□□□ -1.87
SMD2YLR275W DED81P38707 554 aaKnown RBP3.38□□□□□ -1.87
SMD2YLR275W TRS85P46944 698 aa3.38□□□□□ -1.87
SMD2YLR275W GOR1P53839 350 aa3.38□□□□□ -1.87
SMD2YLR275W TIM10P87108 93 aa3.38□□□□□ -1.87
SMD2YLR275W YLR108CQ12259 485 aa3.38□□□□□ -1.87
SMD2YLR275W RRD2Q12461 358 aa3.38□□□□□ -1.87
SMD2YLR275W RHO2P06781 192 aa3.37□□□□□ -1.87
SMD2YLR275W ATP10P18496 279 aa3.37□□□□□ -1.87
SMD2YLR275W SPB1P25582 841 aaPredicted RBP3.37□□□□□ -1.87
SMD2YLR275W RAD14P28519 371 aa3.37□□□□□ -1.87
SMD2YLR275W AFG1P32317 509 aa3.37□□□□□ -1.87
SMD2YLR275W GYP6P32806 458 aa3.37□□□□□ -1.87
SMD2YLR275W SDH3P33421 198 aa3.37□□□□□ -1.87
SMD2YLR275W MIX23P38162 196 aa3.37□□□□□ -1.87
SMD2YLR275W VID24P38263 362 aa3.37□□□□□ -1.87
SMD2YLR275W FAA2P39518 744 aa3.37□□□□□ -1.87
SMD2YLR275W REE1P40893 198 aa3.37□□□□□ -1.87
SMD2YLR275W SDT1P53078 280 aa3.37□□□□□ -1.87
SMD2YLR275W NCS2P53923 493 aaPredicted RBP3.37□□□□□ -1.87
SMD2YLR275W MRP51Q02950 344 aa3.37□□□□□ -1.87
SMD2YLR275W TSR1Q07381 788 aaKnown RBP3.37□□□□□ -1.87
SMD2YLR275W ARG3P05150 338 aa3.36□□□□□ -1.87
SMD2YLR275W SAM1P10659 382 aaKnown RBP3.36□□□□□ -1.87
SMD2YLR275W SAM2P19358 384 aaKnown RBP3.36□□□□□ -1.87
SMD2YLR275W REC114P32841 428 aa3.36□□□□□ -1.87
SMD2YLR275W PMT1P33775 817 aa3.36□□□□□ -1.87
SMD2YLR275W YCR041WP37265 110 aa3.36□□□□□ -1.87
SMD2YLR275W THI2P38141 450 aa3.36□□□□□ -1.87
SMD2YLR275W MET18P40469 1032 aa3.36□□□□□ -1.87
SMD2YLR275W HXT14P42833 540 aa3.36□□□□□ -1.87
SMD2YLR275W WWM1P43582 211 aaKnown RBP3.36□□□□□ -1.87
SMD2YLR275W YGR149WP48236 432 aa3.36□□□□□ -1.87
SMD2YLR275W RMD9P53140 646 aaKnown RBP3.36□□□□□ -1.87
SMD2YLR275W TOF1P53840 1238 aa3.36□□□□□ -1.87
SMD2YLR275W MRPL35Q06678 367 aa3.36□□□□□ -1.87
SMD2YLR275W YDL121CQ07541 149 aa3.36□□□□□ -1.87
SMD2YLR275W RRG7Q08774 242 aaPredicted RBP3.36□□□□□ -1.87
SMD2YLR275W ISY1P21374 235 aaPredicted RBP3.35□□□□□ -1.87
SMD2YLR275W GPI10P30777 616 aa3.35□□□□□ -1.87
SMD2YLR275W PTH1P38876 190 aaKnown RBP3.35□□□□□ -1.87
SMD2YLR275W ARF3P40994 183 aaRIP-Chip data3.35□□□□□ -1.87not detected
SMD2YLR275W OST1P41543 476 aaKnown RBP3.35□□□□□ -1.87
SMD2YLR275W SSN8P47821 323 aa3.35□□□□□ -1.87
SMD2YLR275W YIP1P53039 248 aa3.35□□□□□ -1.87
SMD2YLR275W MUM3Q08750 479 aa3.35□□□□□ -1.87
SMD2YLR275W RIM20Q12033 661 aa3.35□□□□□ -1.87
SMD2YLR275W MED1Q12321 566 aa3.35□□□□□ -1.87
SMD2YLR275W CLN3P13365 580 aa3.34□□□□□ -1.87
SMD2YLR275W SPS22P25380 463 aa3.34□□□□□ -1.87
SMD2YLR275W IDH2P28241 369 aaKnown RBP3.34□□□□□ -1.87
SMD2YLR275W STB6P36085 766 aa3.34□□□□□ -1.87
SMD2YLR275W SWD3P38123 315 aa3.34□□□□□ -1.87
SMD2YLR275W RRT2P38332 387 aa3.34□□□□□ -1.87
SMD2YLR275W MST28P39552 234 aa3.34□□□□□ -1.87
SMD2YLR275W PCP1P53259 346 aa3.34□□□□□ -1.87
SMD2YLR275W DSL1P53847 754 aa3.34□□□□□ -1.87
SMD2YLR275W JJJ1P53863 590 aa3.34□□□□□ -1.87
SMD2YLR275W RQC1Q05468 723 aaKnown RBP3.34□□□□□ -1.87
SMD2YLR275W TMC1Q08422 150 aaPredicted RBP3.34□□□□□ -1.87
SMD2YLR275W HRT3Q12347 344 aa3.34□□□□□ -1.87
SMD2YLR275W RRI2Q12348 645 aa3.34□□□□□ -1.87
SMD2YLR275W SPS4P09937 338 aa3.33□□□□□ -1.88
SMD2YLR275W VMA13P41807 478 aaKnown RBP3.33□□□□□ -1.88
SMD2YLR275W TFG2P41896 400 aaPredicted RBP3.33□□□□□ -1.88
SMD2YLR275W KTR5P53966 522 aaPredicted RBP3.33□□□□□ -1.88
SMD2YLR275W MHR1Q06630 226 aa3.33□□□□□ -1.88
SMD2YLR275W TIP1P27654 210 aaPredicted RBP3.32□□□□□ -1.88
SMD2YLR275W NIP100P33420 868 aa3.32□□□□□ -1.88
SMD2YLR275W RIB5P38145 238 aa3.32□□□□□ -1.88
SMD2YLR275W UTP9P38882 575 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms