RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE8	YLR047C	THR4	P16120	514 aa	Known RBP	3.1	□□□□□ -1.91
FRE8	YLR047C	GLN3	P18494	730 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	EMP70	P32802	667 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	YME2	P32843	850 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	CSE2	P33308	149 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	HEL1	P36113	551 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	MSR1	P38714	643 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	MOB1	P40484	314 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	YIR016W	P40572	265 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	CDC1	P40986	491 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	GIS1	Q03833	894 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	HEL2	Q05580	639 aa	Known RBP	3.1	□□□□□ -1.91
FRE8	YLR047C	ACF2	Q12168	779 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	YDL007C-A	Q2V2Q0	85 aa		3.1	□□□□□ -1.91
FRE8	YLR047C	FAB1	P34756	2278 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	RSA4	P25382	515 aa	Known RBP	3.09	□□□□□ -1.91
FRE8	YLR047C	TRM2	P33753	639 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	HCS1	P34243	683 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	TUL1	P36096	758 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	LAS1	P36146	502 aa	Predicted RBP	3.09	□□□□□ -1.91
FRE8	YLR047C	ICS2	P38284	255 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	ERV46	P39727	415 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	YTA12	P40341	825 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	SDS3	P40505	327 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	PTR3	P43606	678 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	STU2	P46675	888 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	SAE2	P46946	345 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	MDE1	P47095	244 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	YGR127W	P53275	312 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	CAF130	P53280	1122 aa	Predicted RBP	3.09	□□□□□ -1.91
FRE8	YLR047C	YTP1	P53584	459 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	ARP5	P53946	755 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	PFA5	Q03289	374 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	HCR1	Q05775	265 aa	Known RBP	3.09	□□□□□ -1.91
FRE8	YLR047C	HBT1	Q07653	1046 aa	Known RBP	3.09	□□□□□ -1.91
FRE8	YLR047C	SIL1	Q08199	421 aa		3.09	□□□□□ -1.91
FRE8	YLR047C	SLK19	Q08581	821 aa	Known RBP	3.09	□□□□□ -1.91
FRE8	YLR047C	ADE4	P04046	510 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	TCP1	P12612	559 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	VPS1	P21576	704 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	BOS1	P25385	244 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	IDH2	P28241	369 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	YMC1	P32331	307 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	IMD2	P38697	523 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	YHR054C	P38780	354 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	SER3	P40054	469 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	ULP2	P40537	1034 aa	Predicted RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	IMD3	P50095	523 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	YGR111W	P53265	400 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	PGA2	P53903	129 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	DON1	Q05610	365 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	RRD2	Q12461	358 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	AQY1	P0CD91	305 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	KIN3	P22209	435 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	TRX1	P22217	103 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	MAK32	P23060	363 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	YIM1	P28625	365 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	YKL097C	P34245	136 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	RPL32	P38061	130 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	MRX3	P38172	270 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	SLM4	P38247	162 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	ARP1	P38696	384 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	MUP3	P38734	546 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	AIM22	P47051	409 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	RTT102	P53330	157 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	YMR160W	Q03823	816 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	FUS2	Q05670	677 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	IES4	Q08561	116 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	UAF30	Q08747	228 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	FRE3	Q08905	711 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	YOR389W	Q08912	624 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	PKH2	Q12236	1081 aa	Known RBP	3.08	□□□□□ -1.92
FRE8	YLR047C	SKS1	Q12505	502 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	CCH1	P50077	2039 aa		3.08	□□□□□ -1.92
FRE8	YLR047C	COX4	P04037	155 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	RPL31B	P0C2H9	113 aa	Known RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	RPL1A	P0CX43	217 aa	Known RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	RPL1B	P0CX44	217 aa	Known RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	RAP1	P11938	827 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	CLC1	P17891	233 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	BRF1	P29056	596 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	COT1	P32798	439 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	PXL1	P36166	706 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	SMC3	P47037	1230 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	ERG26	P53199	349 aa	Known RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	TOF1	P53840	1238 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	YNL146W	P53906	100 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	NCS2	P53923	493 aa	Predicted RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	RSM23	Q01163	450 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	HOT1	Q03213	719 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	ECM7	Q06200	448 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	YLH47	Q06493	454 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
FRE8	YLR047C	DCI1	Q08558	271 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	APL4	Q12028	832 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	VPS54	Q12071	889 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	MRH1	Q12117	320 aa	Predicted RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	TIP41	Q12199	356 aa		3.07	□□□□□ -1.92
FRE8	YLR047C	TOR2	P32600	2474 aa	Known RBP	3.07	□□□□□ -1.92
FRE8	YLR047C	HAP2	P06774	265 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms