RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	FYV8	P46949	817 aa	Known RBP	5.3	□□□□□ -1.56
SKG1	YKR100C	RTT103	Q05543	409 aa		5.3	□□□□□ -1.56
SKG1	YKR100C	YDL218W	Q07629	317 aa		5.3	□□□□□ -1.56
SKG1	YKR100C	MYO3	P36006	1272 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	MRPL40	P36534	297 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	MRX3	P38172	270 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	CIS3	P47001	227 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	REG1	Q00816	1014 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	YDR415C	Q04033	374 aa	Predicted RBP	5.29	□□□□□ -1.56
SKG1	YKR100C	YOL159C	Q08300	171 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	VCX1	Q99385	411 aa		5.29	□□□□□ -1.56
SKG1	YKR100C	ERG8	P24521	451 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	DBF20	P32328	564 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	TRS65	P32893	560 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	YIL060W	P40519	144 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	SMK1	P41808	388 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	CTF18	P49956	741 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	GLO2	Q05584	274 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	GLE1	Q12315	538 aa		5.28	□□□□□ -1.56
SKG1	YKR100C	PSD1	P39006	500 aa		5.27	□□□□□ -1.57
SKG1	YKR100C	HEM14	P40012	539 aa		5.27	□□□□□ -1.57
SKG1	YKR100C	MNP1	P53163	194 aa	Predicted RBP	5.27	□□□□□ -1.57
SKG1	YKR100C	NNF2	P53253	936 aa		5.27	□□□□□ -1.57
SKG1	YKR100C	INN1	P53901	409 aa		5.27	□□□□□ -1.57
SKG1	YKR100C	SCW10	Q04951	389 aa		5.27	□□□□□ -1.57
SKG1	YKR100C	YOR019W	Q99248	730 aa		5.27	□□□□□ -1.57
SKG1	YKR100C	GID7	P25569	745 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	SKG6	P32900	734 aa	Predicted RBP	5.26	□□□□□ -1.57
SKG1	YKR100C	YIR014W	P40570	242 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	IKS1	P47042	667 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	FLC3	P53121	802 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	IST1	P53843	298 aa	Predicted RBP	5.26	□□□□□ -1.57
SKG1	YKR100C	AQR1	P53943	586 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	CRZ1	P53968	678 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	VID22	Q05934	901 aa		5.26	□□□□□ -1.57
SKG1	YKR100C	VPS3	P23643	1011 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	CDC15	P27636	974 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	XRS2	P33301	854 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	YBR056W	P38081	501 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	RIM2	P38127	377 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	MUM2	P38236	366 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	ATG12	P38316	186 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	AZF1	P41696	914 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	VEL1	P53058	206 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	PSK2	Q08217	1101 aa		5.25	□□□□□ -1.57
SKG1	YKR100C	SAM4	Q08985	325 aa	Known RBP	5.25	□□□□□ -1.57
SKG1	YKR100C	PGA3	Q12746	312 aa	Known RBP	5.25	□□□□□ -1.57
SKG1	YKR100C	HXK2	P04807	486 aa	Known RBP	5.24	□□□□□ -1.57
SKG1	YKR100C	DPH2	P32461	534 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	MKK1	P32490	508 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	ANP1	P32629	500 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	KTR3	P38130	404 aa	Predicted RBP	5.24	□□□□□ -1.57
SKG1	YKR100C	PKP1	P40530	394 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	PKP2	P53170	491 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	NUP100	Q02629	959 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	YMR178W	Q03219	274 aa	Known RBP	5.24	□□□□□ -1.57
SKG1	YKR100C	CWC21	Q03375	135 aa	Known RBP	5.24	□□□□□ -1.57
SKG1	YKR100C	ATG9	Q12142	997 aa		5.24	□□□□□ -1.57
SKG1	YKR100C	SSA3	P09435	649 aa	Known RBP	5.23	□□□□□ -1.57
SKG1	YKR100C	YML002W	P0CF17	737 aa		5.23	□□□□□ -1.57
SKG1	YKR100C	PMS1	P14242	873 aa		5.23	□□□□□ -1.57
SKG1	YKR100C	TEF4	P36008	412 aa	Known RBP	5.23	□□□□□ -1.57
SKG1	YKR100C	PHO90	P39535	881 aa		5.23	□□□□□ -1.57
SKG1	YKR100C	GPI16	P38875	610 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	SEC24	P40482	926 aa	Known RBP	5.22	□□□□□ -1.57
SKG1	YKR100C	IME4	P41833	600 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	GPD2	P41911	440 aa	Known RBP	5.22	□□□□□ -1.57
SKG1	YKR100C	BNA1	P47096	177 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	PYK2	P52489	506 aa	Known RBP	5.22	□□□□□ -1.57
SKG1	YKR100C	YPL014W	Q02606	381 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	CSI1	Q04368	295 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	ADE13	Q05911	482 aa	Known RBP	5.22	□□□□□ -1.57
SKG1	YKR100C	TRM8	Q12009	286 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	NAG1	Q8TGN9	163 aa		5.22	□□□□□ -1.57
SKG1	YKR100C	YLR302C	O13544	120 aa		5.21	□□□□□ -1.58
SKG1	YKR100C	PDA1	P16387	420 aa	Known RBP	5.21	□□□□□ -1.58
SKG1	YKR100C	SEC62	P21825	274 aa		5.21	□□□□□ -1.58
SKG1	YKR100C	RGI2	P40188	164 aa		5.21	□□□□□ -1.58
SKG1	YKR100C	DPB11	P47027	764 aa	Predicted RBP	5.21	□□□□□ -1.58
SKG1	YKR100C	MYO5	Q04439	1219 aa	Known RBP	5.21	□□□□□ -1.58
SKG1	YKR100C	ATG26	Q06321	1198 aa		5.21	□□□□□ -1.58
SKG1	YKR100C	TAF10	Q12030	206 aa		5.21	□□□□□ -1.58
SKG1	YKR100C	ADH7	P25377	361 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	CNS1	P33313	385 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	VID24	P38263	362 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	RIC1	P40395	1056 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	SMC3	P47037	1230 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	YGL242C	P53066	181 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	YPL113C	Q02961	396 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	NUS1	Q12063	375 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	NCB2	Q92317	146 aa		5.2	□□□□□ -1.58
SKG1	YKR100C	RPS19A	P07280	144 aa	Known RBP	5.19	□□□□□ -1.58
SKG1	YKR100C	RPS19B	P07281	144 aa	Predicted RBP	5.19	□□□□□ -1.58
SKG1	YKR100C	APL4	Q12028	832 aa		5.19	□□□□□ -1.58
SKG1	YKR100C	INP53	Q12271	1107 aa		5.19	□□□□□ -1.58
SKG1	YKR100C	STT4	P37297	1900 aa		5.19	□□□□□ -1.58
SKG1	YKR100C	URA2	P07259	2214 aa	Known RBP	5.18	□□□□□ -1.58
SKG1	YKR100C	YBR085C-A	O43137	85 aa		5.18	□□□□□ -1.58
SKG1	YKR100C	DHH1	P39517	506 aa	Known RBP	5.18	□□□□□ -1.58
SKG1	YKR100C	SAP185	P40856	1058 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms