RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	GDH1	P07262	454 aa	Known RBP	4.1	□□□□□ -1.75
EBP2	YKL172W	RPL3	P14126	387 aa	Known RBP	4.1	□□□□□ -1.75
EBP2	YKL172W	REC107	P21651	314 aa		4.1	□□□□□ -1.75
EBP2	YKL172W	HXT3	P32466	567 aa	Known RBP	4.1	□□□□□ -1.75
EBP2	YKL172W	YMR147W	P40218	223 aa	Known RBP	4.1	□□□□□ -1.75
EBP2	YKL172W	FMS1	P50264	508 aa		4.1	□□□□□ -1.75
EBP2	YKL172W	ATP10	P18496	279 aa		4.09	□□□□□ -1.75
EBP2	YKL172W	MCK1	P21965	375 aa	Known RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	IDH2	P28241	369 aa	Known RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	FRE2	P36033	711 aa		4.09	□□□□□ -1.75
EBP2	YKL172W	VMA13	P41807	478 aa	Known RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	TFG2	P41896	400 aa	Predicted RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	GPD2	P41911	440 aa	Known RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	RPA49	Q01080	415 aa	Predicted RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	RRG1	Q12167	365 aa	Predicted RBP	4.09	□□□□□ -1.75
EBP2	YKL172W	RKM5	Q12367	367 aa		4.09	□□□□□ -1.75
EBP2	YKL172W	YAR066W	P0CX18	203 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	YHR214W	P0CX19	203 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	YCR022C	P25620	114 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	CPR3	P25719	182 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	ATS1	P31386	333 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	SAS3	P34218	831 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	KEL1	P38853	1164 aa	Known RBP	4.08	□□□□□ -1.76
EBP2	YKL172W	CAF40	P53829	373 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	DSL1	P53847	754 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	PNG1	Q02890	363 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	CTF3	Q12748	733 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	YOL159C-A	Q3E769	90 aa		4.08	□□□□□ -1.76
EBP2	YKL172W	HEM2	P05373	342 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	PPH22	P23595	377 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	NDI1	P32340	513 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	NIP100	P33420	868 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	BYE1	P36106	594 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	ARA1	P38115	344 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	THI2	P38141	450 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	NTC20	P38302	140 aa	Predicted RBP	4.07	□□□□□ -1.76
EBP2	YKL172W	IDP2	P41939	412 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	IMP4	P53941	290 aa	Known RBP	4.07	□□□□□ -1.76
EBP2	YKL172W	YMR155W	Q03795	547 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	RRP45	Q05636	305 aa	Known RBP	4.07	□□□□□ -1.76
EBP2	YKL172W	HSP42	Q12329	375 aa		4.07	□□□□□ -1.76
EBP2	YKL172W	YRF1-4	O13559	1382 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	PRP16	P15938	1071 aa	Predicted RBP	4.06	□□□□□ -1.76
EBP2	YKL172W	YIM1	P28625	365 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	AGA1	P32323	725 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	VHC1	P38329	1120 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	ISC1	P40015	477 aa	Known RBP	4.06	□□□□□ -1.76
EBP2	YKL172W	LSM5	P40089	93 aa	Known RBP	4.06	□□□□□ -1.76
EBP2	YKL172W	SSU1	P41930	458 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	SSN8	P47821	323 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	MSO1	P53604	210 aa	Known RBP	4.06	□□□□□ -1.76
EBP2	YKL172W	ODC1	Q03028	310 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	HSP31	Q04432	237 aa		4.06	□□□□□ -1.76
EBP2	YKL172W	YLR278C	Q05854	1341 aa		4.05	□□□□□ -1.76
EBP2	YKL172W	PRP21	P32524	280 aa	Predicted RBP	4.05	□□□□□ -1.76
EBP2	YKL172W	RML2	P32611	393 aa		4.05	□□□□□ -1.76
EBP2	YKL172W	RGT1	P32862	1170 aa		4.05	□□□□□ -1.76
EBP2	YKL172W	PIR3	Q03180	325 aa		4.05	□□□□□ -1.76
EBP2	YKL172W	RRD2	Q12461	358 aa		4.05	□□□□□ -1.76
EBP2	YKL172W	HIS4	P00815	799 aa	Known RBP	4.04	□□□□□ -1.76
EBP2	YKL172W	RIP1	P08067	215 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	YCR100C	P25606	316 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	YHR218W	P38899	603 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	CCT2	P39076	527 aa	Known RBP	4.04	□□□□□ -1.76
EBP2	YKL172W	GCD10	P41814	478 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	ECM27	P47144	725 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	POP6	P53218	158 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	KAP120	Q02932	1032 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	MRP51	Q02950	344 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	HNT3	Q08702	217 aa		4.04	□□□□□ -1.76
EBP2	YKL172W	HIP1	P06775	603 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	CPR1	P14832	162 aa	Known RBP	4.03	□□□□□ -1.76
EBP2	YKL172W	SRV2	P17555	526 aa	Known RBP	4.03	□□□□□ -1.76
EBP2	YKL172W	RNA14	P25298	677 aa	Known RBP	4.03	□□□□□ -1.76
EBP2	YKL172W	YCR051W	P25631	222 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	APE2	P32454	952 aa	Known RBP	4.03	□□□□□ -1.76
EBP2	YKL172W	GLC7	P32598	312 aa	Known RBP	4.03	□□□□□ -1.76
EBP2	YKL172W	YME2	P32843	850 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	PIM1	P36775	1133 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	YHR054C	P38780	354 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	KRE9	P39005	276 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	COS5	P47187	383 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	AVT4	P50944	713 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	YGL138C	P53122	345 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	IBD2	P53892	351 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	DON1	Q05610	365 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	COS7	Q07788	383 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	SIL1	Q08199	421 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	MUM3	Q08750	479 aa		4.03	□□□□□ -1.76
EBP2	YKL172W	PMR1	P13586	950 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	ECM25	P32525	599 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	YCR041W	P37265	110 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	TIF5	P38431	405 aa	Known RBP	4.02	□□□□□ -1.77
EBP2	YKL172W	MKT1	P40850	830 aa	Known RBP	4.02	□□□□□ -1.77
EBP2	YKL172W	RRT5	P43607	289 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	YIP1	P53039	248 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	PCP1	P53259	346 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	ARK1	P53974	638 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	SKO1	Q02100	647 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	YDR387C	Q04162	555 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms