RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CDC6	YJL194W	RTC4	P53850	401 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	YDR541C	Q03049	344 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	RLI1	Q03195	608 aa	Known RBP	4.22	□□□□□ -1.73
CDC6	YJL194W	EKI1	Q03764	534 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	HMO1	Q03973	246 aa	Known RBP	4.22	□□□□□ -1.73
CDC6	YJL194W	RPC11	Q04307	110 aa	Predicted RBP	4.22	□□□□□ -1.73
CDC6	YJL194W	UFO1	Q04511	668 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	GET4	Q12125	312 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	MYO4	P32492	1471 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	SWR1	Q05471	1514 aa		4.22	□□□□□ -1.73
CDC6	YJL194W	JIP3	O13555	125 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	YLR415C	O13578	112 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	GAL10	P04397	699 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	RPP2A	P05319	106 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	SPE1	P08432	466 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	STE11	P23561	717 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	MEK1	P24719	497 aa	Predicted RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	IMG1	P25626	169 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	YIM1	P28625	365 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	PRR1	P28708	518 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	HXT1	P32465	570 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	ELM1	P32801	640 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
CDC6	YJL194W	TSA1	P34760	196 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	SIC1	P38634	284 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	MTW1	P39731	289 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	SAP1	P39955	897 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	YMR147W	P40218	223 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	ATM1	P40416	690 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	PTR3	P43606	678 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	HSH155	P49955	971 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	RIB4	P50861	169 aa	Predicted RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	DBP6	P53734	629 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	USA1	Q03714	838 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	CTK1	Q03957	528 aa	Known RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	YMR310C	Q04867	317 aa	Predicted RBP	4.21	□□□□□ -1.73
CDC6	YJL194W	MRPL35	Q06678	367 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	RXT3	Q07458	294 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	CRT10	Q08226	957 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	DSE3	Q08729	430 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	VAM3	Q12241	283 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	FMP16	Q12497	93 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	SFG1	Q12507	346 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	YBR255C-A	Q3E776	120 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	YER175W-A	Q8TGU4	54 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	VPS15	P22219	1454 aa		4.21	□□□□□ -1.73
CDC6	YJL194W	TY3B-G	Q99315	1547 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	YPK9	Q12697	1472 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	ART10	P18634	518 aa	Known RBP	4.21	□□□□□ -1.74
CDC6	YJL194W	YPK2	P18961	677 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	SEC62	P21825	274 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	RVS161	P25343	265 aa	Known RBP	4.21	□□□□□ -1.74
CDC6	YJL194W	ACP1	P32463	125 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	ERG7	P38604	731 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	DIA4	P38705	446 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC6	YJL194W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CDC6	YJL194W	TMN3	P40071	706 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	ABM1	P47146	123 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	TOM22	P49334	152 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	YGR079W	P53249	370 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	OCA2	P53949	197 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	EFM6	P53970	246 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	URH1	Q04179	340 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	STE23	Q06010	1027 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	NDL1	Q06568	189 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	CDA2	Q06703	312 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	SHS1	Q07657	551 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	BSC6	Q08280	497 aa		4.21	□□□□□ -1.74
CDC6	YJL194W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CDC6	YJL194W	GLT1	Q12680	2145 aa	Known RBP	4.2	□□□□□ -1.74
CDC6	YJL194W	DNF1	P32660	1571 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	RPL31B	P0C2H9	113 aa	Known RBP	4.2	□□□□□ -1.74
CDC6	YJL194W	RAP1	P11938	827 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	PRP16	P15938	1071 aa	Predicted RBP	4.2	□□□□□ -1.74
CDC6	YJL194W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CDC6	YJL194W	YCR015C	P25616	317 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	HIR2	P32480	875 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	SIP1	P32578	815 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	ASC1	P38011	319 aa	Known RBP	4.2	□□□□□ -1.74
CDC6	YJL194W	ICS2	P38284	255 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	YRB1	P41920	201 aa	Known RBP	4.2	□□□□□ -1.74
CDC6	YJL194W	AIM22	P47051	409 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	ROG1	P53118	685 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	IMO32	P53219	342 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	YNL260C	P53846	198 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	YDR132C	Q03900	495 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	ARR2	Q06597	130 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	ARR3	Q06598	404 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	PRS5	Q12265	496 aa	Known RBP	4.2	□□□□□ -1.74
CDC6	YJL194W	RRD2	Q12461	358 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	LAG2	Q92325	660 aa		4.2	□□□□□ -1.74
CDC6	YJL194W	GCN2	P15442	1659 aa		4.19	□□□□□ -1.74
CDC6	YJL194W	NUP159	P40477	1460 aa		4.19	□□□□□ -1.74
CDC6	YJL194W	MAS1	P10507	462 aa		4.19	□□□□□ -1.74
CDC6	YJL194W	THR4	P16120	514 aa	Known RBP	4.19	□□□□□ -1.74
CDC6	YJL194W	SPE2	P21182	396 aa		4.19	□□□□□ -1.74
CDC6	YJL194W	YSR3	P23501	404 aa		4.19	□□□□□ -1.74
CDC6	YJL194W	SKG6	P32900	734 aa	Predicted RBP	4.19	□□□□□ -1.74
CDC6	YJL194W	RPC25	P35718	212 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms