RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C MET8P15807 274 aa3.26□□□□□ -1.89
ATG27YJL178C OLE1P21147 510 aaKnown RBP3.26□□□□□ -1.89
ATG27YJL178C SGF29P25554 259 aa3.26□□□□□ -1.89
ATG27YJL178C CSM2P40465 213 aa3.26□□□□□ -1.89
ATG27YJL178C RSM25P40496 264 aa3.26□□□□□ -1.89
ATG27YJL178C SNG1P46950 547 aa3.26□□□□□ -1.89
ATG27YJL178C DRN1P53255 507 aaKnown RBP3.26□□□□□ -1.89
ATG27YJL178C RBA50Q04418 439 aa3.26□□□□□ -1.89
ATG27YJL178C YDL057WQ07379 328 aa3.26□□□□□ -1.89
ATG27YJL178C NCE102Q12207 173 aaRIP-Chip data3.26□□□□□ -1.89not detected
ATG27YJL178C DDP1Q99321 188 aaKnown RBP3.26□□□□□ -1.89
ATG27YJL178C PDA1P16387 420 aaKnown RBP3.25□□□□□ -1.89
ATG27YJL178C ART10P18634 518 aaKnown RBP3.25□□□□□ -1.89
ATG27YJL178C ELO2P25358 347 aa3.25□□□□□ -1.89
ATG27YJL178C ANP1P32629 500 aa3.25□□□□□ -1.89
ATG27YJL178C MYO3P36006 1272 aa3.25□□□□□ -1.89
ATG27YJL178C MRPL10P36520 322 aa3.25□□□□□ -1.89
ATG27YJL178C YFH7P43591 353 aa3.25□□□□□ -1.89
ATG27YJL178C EAF6P47128 113 aa3.25□□□□□ -1.89
ATG27YJL178C IMD4P50094 524 aaKnown RBP3.25□□□□□ -1.89
ATG27YJL178C YGR126WP53274 230 aa3.25□□□□□ -1.89
ATG27YJL178C ARE2P53629 642 aaKnown RBP3.25□□□□□ -1.89
ATG27YJL178C GIS2P53849 153 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
ATG27YJL178C YMR087WQ04299 284 aa3.25□□□□□ -1.89
ATG27YJL178C COQ9Q05779 260 aa3.25□□□□□ -1.89
ATG27YJL178C DIB1Q06819 143 aaPredicted RBP3.25□□□□□ -1.89
ATG27YJL178C CYB2P00175 591 aa3.24□□□□□ -1.89
ATG27YJL178C CBS1P14066 229 aa3.24□□□□□ -1.89
ATG27YJL178C TPM1P17536 199 aaKnown RBP3.24□□□□□ -1.89
ATG27YJL178C VPS17P32913 551 aa3.24□□□□□ -1.89
ATG27YJL178C SWE1P32944 819 aa3.24□□□□□ -1.89
ATG27YJL178C SEF1P34228 1148 aa3.24□□□□□ -1.89
ATG27YJL178C YNK1P36010 153 aaKnown RBP3.24□□□□□ -1.89
ATG27YJL178C SRO77P38163 1010 aa3.24□□□□□ -1.89
ATG27YJL178C PFF1P38244 976 aa3.24□□□□□ -1.89
ATG27YJL178C YBR225WP38321 900 aa3.24□□□□□ -1.89
ATG27YJL178C DHH1P39517 506 aaKnown RBP3.24□□□□□ -1.89
ATG27YJL178C VPS75P53853 264 aa3.24□□□□□ -1.89
ATG27YJL178C TIM10P87108 93 aa3.24□□□□□ -1.89
ATG27YJL178C SHR3Q02774 210 aa3.24□□□□□ -1.89
ATG27YJL178C ERO1Q03103 563 aa3.24□□□□□ -1.89
ATG27YJL178C SCW10Q04951 389 aa3.24□□□□□ -1.89
ATG27YJL178C HCR1Q05775 265 aaKnown RBP3.24□□□□□ -1.89
ATG27YJL178C THI20Q08224 551 aa3.24□□□□□ -1.89
ATG27YJL178C SDH5Q08230 162 aa3.24□□□□□ -1.89
ATG27YJL178C PPT2Q12036 173 aa3.24□□□□□ -1.89
ATG27YJL178C RCN2Q12044 265 aa3.24□□□□□ -1.89
ATG27YJL178C YJR112W-AQ3E743 109 aa3.24□□□□□ -1.89
ATG27YJL178C YBR298C-AQ8TGK4 73 aa3.24□□□□□ -1.89
ATG27YJL178C MYO1P08964 1928 aa3.23□□□□□ -1.89
ATG27YJL178C GAL80P04387 435 aa3.23□□□□□ -1.89
ATG27YJL178C PEP4P07267 405 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C MAK31P23059 88 aa3.23□□□□□ -1.89
ATG27YJL178C MFT1P33441 392 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C MPE1P35728 441 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C TCD2P36101 447 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C NOP4P37838 685 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C RFT1P38206 574 aaPredicted RBP3.23□□□□□ -1.89
ATG27YJL178C REG2P38232 338 aa3.23□□□□□ -1.89
ATG27YJL178C RXT2P38255 430 aa3.23□□□□□ -1.89
ATG27YJL178C MDM31P38880 579 aa3.23□□□□□ -1.89
ATG27YJL178C CIN4P39110 191 aa3.23□□□□□ -1.89
ATG27YJL178C ALG5P40350 334 aa3.23□□□□□ -1.89
ATG27YJL178C SAM50P53969 484 aa3.23□□□□□ -1.89
ATG27YJL178C RHO4Q00246 291 aa3.23□□□□□ -1.89
ATG27YJL178C RPM2Q02773 1202 aa3.23□□□□□ -1.89
ATG27YJL178C MYO5Q04439 1219 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C MFB1Q04922 465 aa3.23□□□□□ -1.89
ATG27YJL178C MRD1Q06106 887 aaKnown RBP3.23□□□□□ -1.89
ATG27YJL178C RLM1Q12224 676 aa3.23□□□□□ -1.89
ATG27YJL178C MED1Q12321 566 aa3.23□□□□□ -1.89
ATG27YJL178C MRS3P10566 314 aa3.22□□□□□ -1.89
ATG27YJL178C PEP5P12868 1029 aa3.22□□□□□ -1.89
ATG27YJL178C SEC62P21825 274 aa3.22□□□□□ -1.89
ATG27YJL178C ICL1P28240 557 aaPredicted RBP3.22□□□□□ -1.89
ATG27YJL178C BMH2P34730 273 aaKnown RBP3.22□□□□□ -1.89
ATG27YJL178C ECM15P35195 104 aa3.22□□□□□ -1.89
ATG27YJL178C YKL023WP36103 277 aaKnown RBP3.22□□□□□ -1.89
ATG27YJL178C NOC2P39744 710 aaKnown RBP3.22□□□□□ -1.89
ATG27YJL178C AIM22P47051 409 aa3.22□□□□□ -1.89
ATG27YJL178C VID30P53076 958 aa3.22□□□□□ -1.89
ATG27YJL178C IMP4P53941 290 aaKnown RBP3.22□□□□□ -1.89
ATG27YJL178C GLO2Q05584 274 aa3.22□□□□□ -1.89
ATG27YJL178C VPS38Q05919 439 aa3.22□□□□□ -1.89
ATG27YJL178C HSH49Q99181 213 aaPredicted RBP3.22□□□□□ -1.89
ATG27YJL178C RAD61Q99359 647 aa3.22□□□□□ -1.89
ATG27YJL178C RAD52P06778 471 aaKnown RBP3.21□□□□□ -1.9
ATG27YJL178C APE1P14904 514 aa3.21□□□□□ -1.9
ATG27YJL178C ATS1P31386 333 aa3.21□□□□□ -1.9
ATG27YJL178C PCH2P38126 564 aa3.21□□□□□ -1.9
ATG27YJL178C MSR1P38714 643 aa3.21□□□□□ -1.9
ATG27YJL178C YHR210CP38893 341 aa3.21□□□□□ -1.9
ATG27YJL178C VPS52P39904 641 aa3.21□□□□□ -1.9
ATG27YJL178C YEL057CP39983 233 aa3.21□□□□□ -1.9
ATG27YJL178C IKS1P47042 667 aa3.21□□□□□ -1.9
ATG27YJL178C ALT2P52892 507 aa3.21□□□□□ -1.9
ATG27YJL178C CUE3P53137 624 aaKnown RBP3.21□□□□□ -1.9
ATG27YJL178C SUB1P54000 292 aaKnown RBP3.21□□□□□ -1.9
ATG27YJL178C RPT6Q01939 405 aaKnown RBP3.21□□□□□ -1.9
ATG27YJL178C PRP42Q03776 544 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms