RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	PHB1	P40961	287 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	MRS2	Q01926	470 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	MTG1	Q03151	367 aa	Predicted RBP	3.57	□□□□□ -1.84
SGN1	YIR001C	YDR338C	Q05497	695 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	OMS1	Q06668	471 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	ATG23	Q06671	453 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	YDL218W	Q07629	317 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	IMA2	Q08295	589 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	RAX1	Q08760	435 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	AKR2	Q12013	749 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	AIM41	Q12032	185 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	NUS1	Q12063	375 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	TPO4	Q12256	659 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	ZRT2	Q12436	422 aa		3.57	□□□□□ -1.84
SGN1	YIR001C	COX1	P00401	534 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	PHO5	P00635	467 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	RSR1	P13856	272 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	PRP16	P15938	1071 aa	Predicted RBP	3.56	□□□□□ -1.84
SGN1	YIR001C	PRP2	P20095	876 aa	Predicted RBP	3.56	□□□□□ -1.84
SGN1	YIR001C	ARG1	P22768	420 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	YCR102C	P25608	368 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	HRR25	P29295	494 aa	Known RBP	3.56	□□□□□ -1.84
SGN1	YIR001C	URA10	P30402	227 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	UGP1	P32861	499 aa	Known RBP	3.56	□□□□□ -1.84
SGN1	YIR001C	SHM2	P37291	469 aa	Known RBP	3.56	□□□□□ -1.84
SGN1	YIR001C	PCH2	P38126	564 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	MSG5	P38590	489 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	INM1	P38710	295 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	MEP1	P40260	492 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	EFM4	P40516	257 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	GAT1	P43574	510 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	YFL012W	P43580	148 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	PET130	P47065	347 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	HOC1	P47124	396 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	YGR012W	P53206	393 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	ALF1	P53904	254 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	AAT1	Q01802	451 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	YAP6	Q03935	383 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	YMR034C	Q05131	434 aa	Predicted RBP	3.56	□□□□□ -1.84
SGN1	YIR001C	YLR224W	Q05947	369 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	SLD7	Q08457	257 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	ATG29	Q12092	213 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	RGT2	Q12300	763 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	RMD5	Q12508	421 aa		3.56	□□□□□ -1.84
SGN1	YIR001C	SEC16	P48415	2195 aa	Known RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	ADE8	P04161	214 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	CDC21	P06785	304 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	ENA1	P13587	1091 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
SGN1	YIR001C	CKI1	P20485	582 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	PHO3	P24031	467 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	CHA1	P25379	360 aa	Known RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	TPS2	P31688	896 aa	Known RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	BEM3	P32873	1128 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	STO1	P34160	861 aa	Known RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	YKL100C	P34248	587 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
SGN1	YIR001C	VHC1	P38329	1120 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	EFM1	P38732	585 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	GPI16	P38875	610 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	MET30	P39014	640 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	SIT1	P39980	628 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	NDE1	P40215	560 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	MNT3	P40549	630 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	CUP9	P41817	306 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	CHA4	P43634	648 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	JHD2	P47156	728 aa	Predicted RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	YJR149W	P47177	404 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	HSV2	P50079	448 aa	Predicted RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	MDM34	P53083	459 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	YGR015C	P53208	328 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	GTF1	P53260	183 aa	Predicted RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	CLD1	P53264	445 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	PRP38	Q00723	242 aa	Predicted RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	ENA2	Q01896	1091 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	FDC1	Q03034	503 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	ROY1	Q04847	553 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	TDA5	Q06417	326 aa	Known RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	XYL2	Q07993	356 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	MRH1	Q12117	320 aa	Predicted RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	YOR342C	Q12182	319 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	PRS5	Q12265	496 aa	Known RBP	3.55	□□□□□ -1.84
SGN1	YIR001C	PST1	Q12355	444 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	ENA5	Q12691	1091 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	SRN2	Q99176	213 aa		3.55	□□□□□ -1.84
SGN1	YIR001C	STE2	D6VTK4	431 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	GRR1	P24814	1151 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	ADE1	P27616	306 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	URA7	P28274	579 aa	Known RBP	3.54	□□□□□ -1.84
SGN1	YIR001C	YJU2	P28320	278 aa	Predicted RBP	3.54	□□□□□ -1.84
SGN1	YIR001C	ATO2	P32907	282 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	RPS27A	P35997	82 aa	Known RBP	3.54	□□□□□ -1.84
SGN1	YIR001C	EBP2	P36049	427 aa	Known RBP	3.54	□□□□□ -1.84
SGN1	YIR001C	APT2	P36973	181 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	RRN10	P38204	145 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	RPS27B	P38711	82 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	YHR112C	P38716	378 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	CAJ1	P39101	391 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	HAT2	P39984	401 aa		3.54	□□□□□ -1.84
SGN1	YIR001C	SEC9	P40357	651 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms