RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YKR015CP36111 568 aa7.39□□□□□ -1.23
SNP1YIL061C SPC34P36131 295 aa7.39□□□□□ -1.23
SNP1YIL061C UBP14P38237 781 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C COS111P38308 924 aa7.39□□□□□ -1.23
SNP1YIL061C INM1P38710 295 aa7.39□□□□□ -1.23
SNP1YIL061C MED6P38782 295 aa7.39□□□□□ -1.23
SNP1YIL061C GIC1P38785 314 aa7.39□□□□□ -1.23
SNP1YIL061C YPT35P38815 214 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C CCT6P39079 546 aa7.39□□□□□ -1.23
SNP1YIL061C MNN9P39107 395 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C YEL073CP39974 107 aa7.39□□□□□ -1.23
SNP1YIL061C THO1P40040 218 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C LSM5P40089 93 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C NDE1P40215 560 aa7.39□□□□□ -1.23
SNP1YIL061C YJL070CP40361 888 aa7.39□□□□□ -1.23
SNP1YIL061C PFA3P42836 336 aa7.39□□□□□ -1.23
SNP1YIL061C EMC2P47133 292 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C YHM2Q04013 314 aa7.39□□□□□ -1.23
SNP1YIL061C REH1Q06709 432 aa7.39□□□□□ -1.23
SNP1YIL061C THP1Q08231 455 aa7.39□□□□□ -1.23
SNP1YIL061C RSA1Q08932 381 aa7.39□□□□□ -1.23
SNP1YIL061C YLL054CQ12244 843 aa7.39□□□□□ -1.23
SNP1YIL061C RPN5Q12250 445 aaKnown RBP7.39□□□□□ -1.23
SNP1YIL061C RGT2Q12300 763 aa7.39□□□□□ -1.23
SNP1YIL061C NSI1Q12457 570 aa7.39□□□□□ -1.23
SNP1YIL061C LEU4P06208 619 aaKnown RBP7.38□□□□□ -1.23
SNP1YIL061C KAR1P11927 433 aa7.38□□□□□ -1.23
SNP1YIL061C TYR1P20049 452 aa7.38□□□□□ -1.23
SNP1YIL061C CTR86P25355 563 aa7.38□□□□□ -1.23
SNP1YIL061C SPO23P33757 523 aa7.38□□□□□ -1.23
SNP1YIL061C SPC42P36094 363 aa7.38□□□□□ -1.23
SNP1YIL061C GOS1P38736 223 aa7.38□□□□□ -1.23
SNP1YIL061C AXL2P38928 823 aa7.38□□□□□ -1.23
SNP1YIL061C GGC1P38988 300 aa7.38□□□□□ -1.23
SNP1YIL061C GIM4P40005 111 aaKnown RBP7.38□□□□□ -1.23
SNP1YIL061C YRB2P40517 327 aa7.38□□□□□ -1.23
SNP1YIL061C OYE3P41816 400 aaPredicted RBP7.38□□□□□ -1.23
SNP1YIL061C GCV1P48015 400 aa7.38□□□□□ -1.23
SNP1YIL061C GOR1P53839 350 aa7.38□□□□□ -1.23
SNP1YIL061C TDA7P53882 636 aaPredicted RBP7.38□□□□□ -1.23
SNP1YIL061C IGO1P53897 168 aa7.38□□□□□ -1.23
SNP1YIL061C YNL140CP53910 189 aa7.38□□□□□ -1.23
SNP1YIL061C SFB2P53953 876 aa7.38□□□□□ -1.23
SNP1YIL061C SMP3Q04174 516 aa7.38□□□□□ -1.23
SNP1YIL061C RSA3Q05942 220 aaKnown RBP7.38□□□□□ -1.23
SNP1YIL061C VPS74Q06385 345 aa7.38□□□□□ -1.23
SNP1YIL061C VIK1Q12045 647 aa7.38□□□□□ -1.23
SNP1YIL061C ATG29Q12092 213 aa7.38□□□□□ -1.23
SNP1YIL061C NTO1Q12311 748 aa7.38□□□□□ -1.23
SNP1YIL061C DBP10Q12389 995 aaKnown RBP7.38□□□□□ -1.23
SNP1YIL061C MDM12Q92328 271 aa7.38□□□□□ -1.23
SNP1YIL061C ATP4P05626 244 aa7.37□□□□□ -1.23
SNP1YIL061C YKR104WP0CE69 306 aa7.37□□□□□ -1.23
SNP1YIL061C RPP1BP10622 106 aaKnown RBP7.37□□□□□ -1.23
SNP1YIL061C NTG1P31378 399 aa7.37□□□□□ -1.23
SNP1YIL061C SAC1P32368 623 aaKnown RBP7.37□□□□□ -1.23
SNP1YIL061C SEC17P32602 292 aa7.37□□□□□ -1.23
SNP1YIL061C TFB1P32776 642 aa7.37□□□□□ -1.23
SNP1YIL061C MAC1P35192 417 aa7.37□□□□□ -1.23
SNP1YIL061C GLG1P36143 616 aa7.37□□□□□ -1.23
SNP1YIL061C TSL1P38427 1098 aaKnown RBP7.37□□□□□ -1.23
SNP1YIL061C RCK1P38622 512 aa7.37□□□□□ -1.23
SNP1YIL061C YFR020WP43600 232 aa7.37□□□□□ -1.23
SNP1YIL061C GUS1P46655 708 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
SNP1YIL061C YMR099CQ03161 297 aaKnown RBP7.37□□□□□ -1.23
SNP1YIL061C DTD1Q07648 150 aaKnown RBP7.37□□□□□ -1.23
SNP1YIL061C COS7Q07788 383 aa7.37□□□□□ -1.23
SNP1YIL061C ATG10Q07879 167 aa7.37□□□□□ -1.23
SNP1YIL061C VPS68Q12016 184 aa7.37□□□□□ -1.23
SNP1YIL061C BRR1Q99177 341 aaPredicted RBP7.37□□□□□ -1.23
SNP1YIL061C INH1P01097 85 aa7.36□□□□□ -1.23
SNP1YIL061C HTA1P04911 132 aaKnown RBP7.36□□□□□ -1.23
SNP1YIL061C UNG1P12887 359 aa7.36□□□□□ -1.23
SNP1YIL061C TRX3P25372 127 aa7.36□□□□□ -1.23
SNP1YIL061C UBC8P28263 218 aa7.36□□□□□ -1.23
SNP1YIL061C SSE2P32590 693 aaKnown RBP7.36□□□□□ -1.23
SNP1YIL061C CAT2P32796 670 aaKnown RBP7.36□□□□□ -1.23
SNP1YIL061C MRPL6P32904 214 aa7.36□□□□□ -1.23
SNP1YIL061C ARA1P38115 344 aa7.36□□□□□ -1.23
SNP1YIL061C MTG2P38860 518 aa7.36□□□□□ -1.23
SNP1YIL061C GPI8P49018 411 aa7.36□□□□□ -1.23
SNP1YIL061C MUP1P50276 574 aa7.36□□□□□ -1.23
SNP1YIL061C MUS81Q04149 632 aaPredicted RBP7.36□□□□□ -1.23
SNP1YIL061C ARG7Q04728 441 aa7.36□□□□□ -1.23
SNP1YIL061C ARR1Q06596 294 aa7.36□□□□□ -1.23
SNP1YIL061C YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
SNP1YIL061C PUS7Q08647 676 aaKnown RBP7.36□□□□□ -1.23
SNP1YIL061C TRM8Q12009 286 aa7.36□□□□□ -1.23
SNP1YIL061C Q0182Q9ZZW1 134 aa7.36□□□□□ -1.23
SNP1YIL061C RPS14AP06367 137 aaKnown RBP7.35□□□□□ -1.23
SNP1YIL061C HIS5P07172 385 aa7.35□□□□□ -1.23
SNP1YIL061C TY2A-LR1P0C2J4 438 aa7.35□□□□□ -1.23
SNP1YIL061C TY2A-FP0CX61 438 aa7.35□□□□□ -1.23
SNP1YIL061C TY2A-GR2P0CX62 438 aa7.35□□□□□ -1.23
SNP1YIL061C TY2A-CP25383 438 aa7.35□□□□□ -1.23
SNP1YIL061C SYP1P25623 870 aaKnown RBP7.35□□□□□ -1.23
SNP1YIL061C MGM101P32787 269 aaKnown RBP7.35□□□□□ -1.23
SNP1YIL061C YKL097CP34245 136 aa7.35□□□□□ -1.23
SNP1YIL061C YKL151CP36059 337 aa7.35□□□□□ -1.23
SNP1YIL061C ECM8P38246 354 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms