RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W CHS1P08004 1131 aa2.59□□□□□ -2
SSF1YHR066W LPD1P09624 499 aaKnown RBP2.59□□□□□ -2
SSF1YHR066W CKA1P15790 372 aa2.59□□□□□ -2
SSF1YHR066W ROX1P25042 368 aa2.59□□□□□ -2
SSF1YHR066W SPB1P25582 841 aaPredicted RBP2.59□□□□□ -2
SSF1YHR066W YBR139WP38109 508 aa2.59□□□□□ -2
SSF1YHR066W SMF1P38925 575 aa2.59□□□□□ -2
SSF1YHR066W SPG5P42933 373 aa2.59□□□□□ -2
SSF1YHR066W TRS85P46944 698 aa2.59□□□□□ -2
SSF1YHR066W URB2P47108 1174 aa2.59□□□□□ -2
SSF1YHR066W PIR3Q03180 325 aa2.59□□□□□ -2
SSF1YHR066W RQC1Q05468 723 aaKnown RBP2.59□□□□□ -2
SSF1YHR066W YML133CQ03099 1374 aa2.58□□□□□ -2
SSF1YHR066W YLL067CQ07888 1374 aa2.58□□□□□ -2
SSF1YHR066W YLL066CQ99208 1374 aa2.58□□□□□ -2
SSF1YHR066W LEU4P06208 619 aaKnown RBP2.58□□□□□ -2
SSF1YHR066W HIP1P06775 603 aa2.58□□□□□ -2
SSF1YHR066W CPR1P14832 162 aaKnown RBP2.58□□□□□ -2
SSF1YHR066W ATP10P18496 279 aa2.58□□□□□ -2
SSF1YHR066W AFG1P32317 509 aa2.58□□□□□ -2
SSF1YHR066W NDI1P32340 513 aa2.58□□□□□ -2
SSF1YHR066W GLC7P32598 312 aaKnown RBP2.58□□□□□ -2
SSF1YHR066W ISC1P40015 477 aaKnown RBP2.58□□□□□ -2
SSF1YHR066W YPI1P43587 155 aa2.58□□□□□ -2
SSF1YHR066W YGR149WP48236 432 aa2.58□□□□□ -2
SSF1YHR066W MRPL19P53875 158 aa2.58□□□□□ -2
SSF1YHR066W TAF11Q04226 346 aa2.58□□□□□ -2
SSF1YHR066W REV3P14284 1504 aa2.57□□□□□ -2
SSF1YHR066W RHO2P06781 192 aa2.57□□□□□ -2
SSF1YHR066W YCR100CP25606 316 aa2.57□□□□□ -2
SSF1YHR066W RAD14P28519 371 aa2.57□□□□□ -2
SSF1YHR066W MRP4P32902 394 aa2.57□□□□□ -2
SSF1YHR066W RSM22P36056 628 aa2.57□□□□□ -2
SSF1YHR066W RFS1P38234 210 aaKnown RBP2.57□□□□□ -2
SSF1YHR066W UTP9P38882 575 aaKnown RBP2.57□□□□□ -2
SSF1YHR066W MKT1P40850 830 aaKnown RBP2.57□□□□□ -2
SSF1YHR066W MDM1Q01846 1127 aa2.57□□□□□ -2
SSF1YHR066W SOV1Q04748 898 aa2.57□□□□□ -2
SSF1YHR066W YOL159C-AQ3E769 90 aa2.57□□□□□ -2
SSF1YHR066W HSL1P34244 1518 aa2.57□□□□□ -2
SSF1YHR066W PPH22P23595 377 aa2.56□□□□□ -2
SSF1YHR066W IDH2P28241 369 aaKnown RBP2.56□□□□□ -2
SSF1YHR066W YIM1P28625 365 aa2.56□□□□□ -2
SSF1YHR066W HXT3P32466 567 aaKnown RBP2.56□□□□□ -2
SSF1YHR066W SDS24P38314 527 aa2.56□□□□□ -2
SSF1YHR066W YBP1P38315 674 aa2.56□□□□□ -2
SSF1YHR066W CCT2P39076 527 aaKnown RBP2.56□□□□□ -2
SSF1YHR066W TFG2P41896 400 aaPredicted RBP2.56□□□□□ -2
SSF1YHR066W OGG1P53397 376 aaPredicted RBP2.56□□□□□ -2
SSF1YHR066W CAF40P53829 373 aa2.56□□□□□ -2
SSF1YHR066W TSR2Q06672 205 aaKnown RBP2.56□□□□□ -2
SSF1YHR066W RTN2Q12443 393 aa2.56□□□□□ -2
SSF1YHR066W PGA3Q12746 312 aaKnown RBP2.56□□□□□ -2
SSF1YHR066W RTP1Q12751 981 aa2.56□□□□□ -2
SSF1YHR066W ERG3P32353 365 aa2.55□□□□□ -2
SSF1YHR066W NFU1P32860 256 aa2.55□□□□□ -2
SSF1YHR066W CBP4P37267 147 aa2.55□□□□□ -2
SSF1YHR066W YIL067CP40514 678 aa2.55□□□□□ -2
SSF1YHR066W POP6P53218 158 aa2.55□□□□□ -2
SSF1YHR066W RPA49Q01080 415 aaPredicted RBP2.55□□□□□ -2
SSF1YHR066W ODC1Q03028 310 aa2.55□□□□□ -2
SSF1YHR066W THP3Q12049 470 aaKnown RBP2.55□□□□□ -2
SSF1YHR066W SPT6P23615 1451 aaKnown RBP2.55□□□□□ -2
SSF1YHR066W MDS3P53094 1487 aa2.55□□□□□ -2
SSF1YHR066W BUD4P47136 1447 aa2.55□□□□□ -2
SSF1YHR066W ECM5Q03214 1411 aa2.55□□□□□ -2
SSF1YHR066W BPT1P14772 1559 aa2.54□□□□□ -2
SSF1YHR066W CDC31P06704 161 aaKnown RBP2.54□□□□□ -2
SSF1YHR066W RPL3P14126 387 aaKnown RBP2.54□□□□□ -2
SSF1YHR066W RED1P14291 827 aa2.54□□□□□ -2
SSF1YHR066W HEM15P16622 393 aa2.54□□□□□ -2
SSF1YHR066W PRP21P32524 280 aaPredicted RBP2.54□□□□□ -2
SSF1YHR066W NIP100P33420 868 aa2.54□□□□□ -2
SSF1YHR066W SAS3P34218 831 aa2.54□□□□□ -2
SSF1YHR066W YCR041WP37265 110 aa2.54□□□□□ -2
SSF1YHR066W NAT2P37293 288 aa2.54□□□□□ -2
SSF1YHR066W RMD9P53140 646 aaKnown RBP2.54□□□□□ -2
SSF1YHR066W PNG1Q02890 363 aa2.54□□□□□ -2
SSF1YHR066W YOR387CQ08910 206 aa2.54□□□□□ -2
SSF1YHR066W ERV2Q12284 196 aa2.54□□□□□ -2
SSF1YHR066W ERP4Q12450 207 aa2.54□□□□□ -2
SSF1YHR066W YLR278CQ05854 1341 aa2.53□□□□□ -2
SSF1YHR066W RIP1P08067 215 aa2.53□□□□□ -2
SSF1YHR066W SPS4P09937 338 aa2.53□□□□□ -2
SSF1YHR066W YAR066WP0CX18 203 aa2.53□□□□□ -2
SSF1YHR066W YHR214WP0CX19 203 aa2.53□□□□□ -2
SSF1YHR066W SAM1P10659 382 aaKnown RBP2.53□□□□□ -2
SSF1YHR066W SEC63P14906 663 aa2.53□□□□□ -2
SSF1YHR066W SAM2P19358 384 aaKnown RBP2.53□□□□□ -2
SSF1YHR066W NAM9P27929 486 aa2.53□□□□□ -2
SSF1YHR066W CRM1P30822 1084 aaKnown RBP2.53□□□□□ -2
SSF1YHR066W GYP6P32806 458 aa2.53□□□□□ -2
SSF1YHR066W MIX23P38162 196 aa2.53□□□□□ -2
SSF1YHR066W PCP1P53259 346 aa2.53□□□□□ -2
SSF1YHR066W GOR1P53839 350 aa2.53□□□□□ -2
SSF1YHR066W NCS2P53923 493 aaPredicted RBP2.53□□□□□ -2
SSF1YHR066W YDR387CQ04162 555 aa2.53□□□□□ -2
SSF1YHR066W SIL1Q08199 421 aa2.53□□□□□ -2
SSF1YHR066W PEP1P32319 1579 aa2.53□□□□□ -2
SSF1YHR066W HIR3P47171 1648 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms