RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C PKP1P40530 394 aa7.64□□□□□ -1.19
SOD2YHR008C RAD17P48581 401 aa7.64□□□□□ -1.19
SOD2YHR008C KTR5P53966 522 aaPredicted RBP7.64□□□□□ -1.19
SOD2YHR008C NHP10Q03435 203 aa7.64□□□□□ -1.19
SOD2YHR008C YMR114CQ04471 368 aaKnown RBP7.64□□□□□ -1.19
SOD2YHR008C YRM1Q12340 786 aa7.64□□□□□ -1.19
SOD2YHR008C APN1P22936 367 aa7.63□□□□□ -1.19
SOD2YHR008C GCD6P32501 712 aaKnown RBP7.63□□□□□ -1.19
SOD2YHR008C RKM3P38222 552 aa7.63□□□□□ -1.19
SOD2YHR008C MCX1P38323 520 aaPredicted RBP7.63□□□□□ -1.19
SOD2YHR008C SEC28P40509 296 aaKnown RBP7.63□□□□□ -1.19
SOD2YHR008C EMC2P47133 292 aaKnown RBP7.63□□□□□ -1.19
SOD2YHR008C SDT1P53078 280 aa7.63□□□□□ -1.19
SOD2YHR008C YGR067CP53243 804 aa7.63□□□□□ -1.19
SOD2YHR008C CGI121Q03705 181 aaKnown RBP7.63□□□□□ -1.19
SOD2YHR008C MUS81Q04149 632 aaPredicted RBP7.63□□□□□ -1.19
SOD2YHR008C YEH1Q07804 573 aa7.63□□□□□ -1.19
SOD2YHR008C REX4Q08237 289 aa7.63□□□□□ -1.19
SOD2YHR008C DYN1P36022 4092 aa7.62□□□□□ -1.19
SOD2YHR008C RAD1P06777 1100 aa7.62□□□□□ -1.19
SOD2YHR008C VPS33P20795 691 aa7.62□□□□□ -1.19
SOD2YHR008C NPR1P22211 790 aa7.62□□□□□ -1.19
SOD2YHR008C ERG8P24521 451 aa7.62□□□□□ -1.19
SOD2YHR008C SPB1P25582 841 aaPredicted RBP7.62□□□□□ -1.19
SOD2YHR008C ZIP1P31111 875 aa7.62□□□□□ -1.19
SOD2YHR008C GCD11P32481 527 aaKnown RBP7.62□□□□□ -1.19
SOD2YHR008C PBP2P38151 413 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
SOD2YHR008C CAB2P40506 365 aa7.62□□□□□ -1.19
SOD2YHR008C SAE2P46946 345 aa7.62□□□□□ -1.19
SOD2YHR008C STE24P47154 453 aa7.62□□□□□ -1.19
SOD2YHR008C SHY1P53266 389 aa7.62□□□□□ -1.19
SOD2YHR008C LSM3P57743 89 aaKnown RBP7.62□□□□□ -1.19
SOD2YHR008C APC4Q04601 652 aa7.62□□□□□ -1.19
SOD2YHR008C HDA2Q06629 674 aa7.62□□□□□ -1.19
SOD2YHR008C GPA2P10823 449 aa7.61□□□□□ -1.19
SOD2YHR008C RPB4P20433 221 aaPredicted RBP7.61□□□□□ -1.19
SOD2YHR008C AMS1P22855 1083 aa7.61□□□□□ -1.19
SOD2YHR008C TRX3P25372 127 aa7.61□□□□□ -1.19
SOD2YHR008C ERG9P29704 444 aa7.61□□□□□ -1.19
SOD2YHR008C RIM1P32445 135 aaKnown RBP7.61□□□□□ -1.19
SOD2YHR008C PTM1P32857 523 aa7.61□□□□□ -1.19
SOD2YHR008C MTR2P34232 184 aaKnown RBP7.61□□□□□ -1.19
SOD2YHR008C GUS1P46655 708 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
SOD2YHR008C MKC7P53379 596 aa7.61□□□□□ -1.19
SOD2YHR008C CRR1Q05790 422 aa7.61□□□□□ -1.19
SOD2YHR008C FAR10Q06001 478 aa7.61□□□□□ -1.19
SOD2YHR008C GAS2Q06135 555 aa7.61□□□□□ -1.19
SOD2YHR008C PDR8Q06149 701 aa7.61□□□□□ -1.19
SOD2YHR008C UBX3Q12229 455 aa7.61□□□□□ -1.19
SOD2YHR008C RUD3Q12234 484 aaKnown RBP7.61□□□□□ -1.19
SOD2YHR008C RUP1Q12242 671 aa7.61□□□□□ -1.19
SOD2YHR008C ZRT2Q12436 422 aa7.61□□□□□ -1.19
SOD2YHR008C FLO9P39712 1322 aa7.6□□□□□ -1.19
SOD2YHR008C HXK2P04807 486 aaKnown RBP7.6□□□□□ -1.19
SOD2YHR008C CDC36P06100 191 aaPredicted RBP7.6□□□□□ -1.19
SOD2YHR008C SPS100P13130 326 aa7.6□□□□□ -1.19
SOD2YHR008C STE12P13574 688 aa7.6□□□□□ -1.19
SOD2YHR008C PRM10P42946 383 aa7.6□□□□□ -1.19
SOD2YHR008C MNN5P46982 586 aa7.6□□□□□ -1.19
SOD2YHR008C YJL043WP47053 257 aa7.6□□□□□ -1.19
SOD2YHR008C MON1P53129 644 aa7.6□□□□□ -1.19
SOD2YHR008C BUD32P53323 261 aa7.6□□□□□ -1.19
SOD2YHR008C CTR9P89105 1077 aa7.6□□□□□ -1.19
SOD2YHR008C GIP3Q03016 1276 aa7.6□□□□□ -1.19
SOD2YHR008C CRN1Q06440 651 aa7.6□□□□□ -1.19
SOD2YHR008C RAD34Q06665 692 aa7.6□□□□□ -1.19
SOD2YHR008C ESA1Q08649 445 aa7.6□□□□□ -1.19
SOD2YHR008C YPL245WQ12179 454 aaKnown RBP7.6□□□□□ -1.19
SOD2YHR008C NCE102Q12207 173 aaRIP-Chip data7.6□□□□□ -1.19not detected
SOD2YHR008C YPR064WQ12492 139 aa7.6□□□□□ -1.19
SOD2YHR008C GCR1P07261 785 aa7.59□□□□□ -1.19
SOD2YHR008C YSF3P0C074 85 aaPredicted RBP7.59□□□□□ -1.19
SOD2YHR008C GCD2P12754 651 aaPredicted RBP7.59□□□□□ -1.19
SOD2YHR008C PTC6P25646 442 aa7.59□□□□□ -1.19
SOD2YHR008C GRE3P38715 327 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
SOD2YHR008C YJR141WP47172 347 aaPredicted RBP7.59□□□□□ -1.19
SOD2YHR008C YGR079WP53249 370 aa7.59□□□□□ -1.19
SOD2YHR008C RPL22BP56628 122 aaKnown RBP7.59□□□□□ -1.19
SOD2YHR008C REC102Q02721 264 aa7.59□□□□□ -1.19
SOD2YHR008C PFA5Q03289 374 aa7.59□□□□□ -1.19
SOD2YHR008C TAF12Q03761 539 aa7.59□□□□□ -1.19
SOD2YHR008C RSA1Q08932 381 aa7.59□□□□□ -1.19
SOD2YHR008C YBL029C-AQ3E756 94 aa7.59□□□□□ -1.19
SOD2YHR008C Q0010Q9ZZX9 128 aa7.59□□□□□ -1.19
SOD2YHR008C ARD1P07347 238 aaPredicted RBP7.58□□□□□ -1.2
SOD2YHR008C ATS1P31386 333 aa7.58□□□□□ -1.2
SOD2YHR008C CBF5P33322 483 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
SOD2YHR008C SNU114P36048 1008 aaKnown RBP7.58□□□□□ -1.2
SOD2YHR008C CBP4P37267 147 aa7.58□□□□□ -1.2
SOD2YHR008C YIL067CP40514 678 aa7.58□□□□□ -1.2
SOD2YHR008C MAL12P53341 584 aa7.58□□□□□ -1.2
SOD2YHR008C ECI1Q05871 280 aa7.58□□□□□ -1.2
SOD2YHR008C YOS9Q99220 542 aa7.58□□□□□ -1.2
SOD2YHR008C YFR010W-AP0C5N0 62 aa7.57□□□□□ -1.2
SOD2YHR008C DAP2P18962 818 aa7.57□□□□□ -1.2
SOD2YHR008C NUP120P35729 1037 aa7.57□□□□□ -1.2
SOD2YHR008C DOA1P36037 715 aa7.57□□□□□ -1.2
SOD2YHR008C TUL1P36096 758 aa7.57□□□□□ -1.2
SOD2YHR008C RPE1P46969 238 aa7.57□□□□□ -1.2
SOD2YHR008C MPS3P47069 682 aa7.57□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms