RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W BCH1Q05029 724 aa5.74□□□□□ -1.49
SKN1YGR143W YLR283WQ05867 314 aa5.74□□□□□ -1.49
SKN1YGR143W VPS74Q06385 345 aa5.74□□□□□ -1.49
SKN1YGR143W LEU9Q12166 604 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W HAL9Q12180 1030 aa5.74□□□□□ -1.49
SKN1YGR143W RBD2Q12270 262 aa5.74□□□□□ -1.49
SKN1YGR143W TMA7Q3E764 64 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W PHR1P05066 565 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
SKN1YGR143W SPT3P06844 337 aa5.74□□□□□ -1.49
SKN1YGR143W RNR1P21524 888 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W MIR1P23641 311 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W MRM1P25270 412 aa5.74□□□□□ -1.49
SKN1YGR143W CAM1P29547 415 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W NDC1P32500 655 aa5.74□□□□□ -1.49
SKN1YGR143W GCG1P32656 232 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W GPT2P36148 743 aa5.74□□□□□ -1.49
SKN1YGR143W AIM29P36154 155 aa5.74□□□□□ -1.49
SKN1YGR143W YPK3P38070 525 aa5.74□□□□□ -1.49
SKN1YGR143W APM2P38700 605 aa5.74□□□□□ -1.49
SKN1YGR143W DPH1P40487 425 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W MPS3P47069 682 aa5.74□□□□□ -1.49
SKN1YGR143W YJR154WP47181 346 aa5.74□□□□□ -1.49
SKN1YGR143W ASK10P48361 1146 aa5.74□□□□□ -1.49
SKN1YGR143W LYS20P48570 428 aaKnown RBP5.74□□□□□ -1.49
SKN1YGR143W PMT5P52867 743 aa5.74□□□□□ -1.49
SKN1YGR143W DOC1P53068 250 aa5.74□□□□□ -1.49
SKN1YGR143W NSA1P53136 463 aaPredicted RBP5.74□□□□□ -1.49
SKN1YGR143W PEX13P80667 386 aa5.74□□□□□ -1.49
SKN1YGR143W CSC1Q06538 782 aa5.74□□□□□ -1.49
SKN1YGR143W CDA1Q06702 301 aa5.74□□□□□ -1.49
SKN1YGR143W REX4Q08237 289 aa5.74□□□□□ -1.49
SKN1YGR143W RTK1Q12100 620 aaPredicted RBP5.74□□□□□ -1.49
SKN1YGR143W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
SKN1YGR143W YDR061WQ12298 539 aa5.74□□□□□ -1.49
SKN1YGR143W PCD1Q12524 340 aa5.74□□□□□ -1.49
SKN1YGR143W RPS9AO13516 197 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W HIS5P07172 385 aa5.73□□□□□ -1.49
SKN1YGR143W RPS6AP0CX37 236 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W RPS6BP0CX38 236 aaPredicted RBP5.73□□□□□ -1.49
SKN1YGR143W TOP3P13099 656 aa5.73□□□□□ -1.49
SKN1YGR143W FBA1P14540 359 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W RGR1P19263 1082 aa5.73□□□□□ -1.49
SKN1YGR143W MAC1P35192 417 aa5.73□□□□□ -1.49
SKN1YGR143W ECM13P38195 257 aa5.73□□□□□ -1.49
SKN1YGR143W AIM3P38266 947 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W STT3P39007 718 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W AKR1P39010 764 aa5.73□□□□□ -1.49
SKN1YGR143W SEO1P39709 593 aa5.73□□□□□ -1.49
SKN1YGR143W TIR3P40552 269 aa5.73□□□□□ -1.49
SKN1YGR143W YIR035CP40579 254 aa5.73□□□□□ -1.49
SKN1YGR143W DIM1P41819 318 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W GNA1P43577 159 aaPredicted RBP5.73□□□□□ -1.49
SKN1YGR143W PYK2P52489 506 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W SCS3P53012 380 aa5.73□□□□□ -1.49
SKN1YGR143W PPT1P53043 513 aa5.73□□□□□ -1.49
SKN1YGR143W YGL039WP53183 348 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W YPL068CQ02749 293 aa5.73□□□□□ -1.49
SKN1YGR143W NGL2Q03264 515 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W YDR248CQ03786 193 aa5.73□□□□□ -1.49
SKN1YGR143W RSB1Q08417 382 aa5.73□□□□□ -1.49
SKN1YGR143W RRP42Q12277 265 aaPredicted RBP5.73□□□□□ -1.49
SKN1YGR143W MTR10Q99189 972 aa5.73□□□□□ -1.49
SKN1YGR143W CDC36P06100 191 aaPredicted RBP5.73□□□□□ -1.49
SKN1YGR143W YPK1P12688 680 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W CDC42P19073 191 aa5.73□□□□□ -1.49
SKN1YGR143W CCA1P21269 546 aa5.73□□□□□ -1.49
SKN1YGR143W VMA5P31412 392 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W TSA1P34760 196 aaKnown RBP5.73□□□□□ -1.49
SKN1YGR143W NTC20P38302 140 aaPredicted RBP5.73□□□□□ -1.49
SKN1YGR143W FMO1P38866 432 aa5.73□□□□□ -1.49
SKN1YGR143W SOP4P39543 234 aaPredicted RBP5.73□□□□□ -1.49
SKN1YGR143W ERV46P39727 415 aa5.73□□□□□ -1.49
SKN1YGR143W AFG3P39925 761 aa5.73□□□□□ -1.49
SKN1YGR143W PHM8P40025 321 aa5.73□□□□□ -1.49
SKN1YGR143W YJL043WP47053 257 aa5.73□□□□□ -1.49
SKN1YGR143W MTQ1P53944 314 aa5.73□□□□□ -1.49
SKN1YGR143W YPL107WQ02873 248 aa5.73□□□□□ -1.49
SKN1YGR143W SLD5Q03406 294 aa5.73□□□□□ -1.49
SKN1YGR143W PNP1Q05788 311 aa5.73□□□□□ -1.49
SKN1YGR143W THI73Q07904 523 aa5.73□□□□□ -1.49
SKN1YGR143W YNG1Q08465 219 aa5.73□□□□□ -1.49
SKN1YGR143W ISN1Q99312 450 aa5.73□□□□□ -1.49
SKN1YGR143W SAS5Q99314 248 aa5.73□□□□□ -1.49
SKN1YGR143W RPS18AP0CX55 146 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W RPS18BP0CX56 146 aaPredicted RBP5.72□□□□□ -1.49
SKN1YGR143W PET54P10834 293 aa5.72□□□□□ -1.49
SKN1YGR143W RAM1P22007 431 aa5.72□□□□□ -1.49
SKN1YGR143W LAC1P28496 418 aa5.72□□□□□ -1.49
SKN1YGR143W BCS1P32839 456 aa5.72□□□□□ -1.49
SKN1YGR143W PGM1P33401 570 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W OAR1P35731 278 aa5.72□□□□□ -1.49
SKN1YGR143W SRP102P36057 244 aaPredicted RBP5.72□□□□□ -1.49
SKN1YGR143W BET3P36149 193 aa5.72□□□□□ -1.49
SKN1YGR143W PDX3P38075 228 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W PBP2P38151 413 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SKN1YGR143W YHR078WP38799 552 aa5.72□□□□□ -1.49
SKN1YGR143W ATG7P38862 630 aa5.72□□□□□ -1.49
SKN1YGR143W SPC97P38863 823 aa5.72□□□□□ -1.49
SKN1YGR143W PFK26P40433 827 aaKnown RBP5.72□□□□□ -1.49
SKN1YGR143W MRX6P48564 524 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms