RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W POP6P53218 158 aa3.19□□□□□ -1.9
USE1YGL098W IMO32P53219 342 aa3.19□□□□□ -1.9
USE1YGL098W CLD1P53264 445 aa3.19□□□□□ -1.9
USE1YGL098W SPC98P53540 846 aa3.19□□□□□ -1.9
USE1YGL098W HHO1P53551 258 aa3.19□□□□□ -1.9
USE1YGL098W RET3P53600 189 aa3.19□□□□□ -1.9
USE1YGL098W CPR8P53728 308 aa3.19□□□□□ -1.9
USE1YGL098W YNR068CP53754 272 aa3.19□□□□□ -1.9
USE1YGL098W CUS2P53830 285 aaPredicted RBP3.19□□□□□ -1.9
USE1YGL098W CBK1P53894 756 aa3.19□□□□□ -1.9
USE1YGL098W HXT15P54854 567 aa3.19□□□□□ -1.9
USE1YGL098W GPD1Q00055 391 aaKnown RBP3.19□□□□□ -1.9
USE1YGL098W TIM44Q01852 431 aa3.19□□□□□ -1.9
USE1YGL098W PEX25Q02969 394 aa3.19□□□□□ -1.9
USE1YGL098W SVL3Q03088 825 aaKnown RBP3.19□□□□□ -1.9
USE1YGL098W YMR099CQ03161 297 aaKnown RBP3.19□□□□□ -1.9
USE1YGL098W NGL2Q03264 515 aaKnown RBP3.19□□□□□ -1.9
USE1YGL098W ENT5Q03769 411 aaKnown RBP3.19□□□□□ -1.9
USE1YGL098W AIM36Q03798 255 aa3.19□□□□□ -1.9
USE1YGL098W CSN9Q03981 162 aa3.19□□□□□ -1.9
USE1YGL098W HSP31Q04432 237 aa3.19□□□□□ -1.9
USE1YGL098W SWF1Q04629 336 aa3.19□□□□□ -1.9
USE1YGL098W PRM6Q04705 352 aa3.19□□□□□ -1.9
USE1YGL098W MFB1Q04922 465 aa3.19□□□□□ -1.9
USE1YGL098W YLR283WQ05867 314 aa3.19□□□□□ -1.9
USE1YGL098W ECM38Q05902 660 aaPredicted RBP3.19□□□□□ -1.9
USE1YGL098W GAS2Q06135 555 aa3.19□□□□□ -1.9
USE1YGL098W SPH1Q06160 661 aa3.19□□□□□ -1.9
USE1YGL098W DIB1Q06819 143 aaPredicted RBP3.19□□□□□ -1.9
USE1YGL098W ASR1Q06834 288 aa3.19□□□□□ -1.9
USE1YGL098W TCO89Q08921 799 aa3.19□□□□□ -1.9
USE1YGL098W YPL199CQ08954 240 aa3.19□□□□□ -1.9
USE1YGL098W HAL9Q12180 1030 aa3.19□□□□□ -1.9
USE1YGL098W AI5_BETAQ9ZZX0 354 aa3.19□□□□□ -1.9
USE1YGL098W FLO11P08640 1367 aa3.18□□□□□ -1.9
USE1YGL098W MRP10O75012 95 aa3.18□□□□□ -1.9
USE1YGL098W PHR1P05066 565 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
USE1YGL098W TPK1P06244 397 aa3.18□□□□□ -1.9
USE1YGL098W CDC33P07260 213 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W GCD1P09032 578 aaPredicted RBP3.18□□□□□ -1.9
USE1YGL098W MIS1P09440 975 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W COS2P0CX12 379 aa3.18□□□□□ -1.9
USE1YGL098W COS3P0CX13 379 aa3.18□□□□□ -1.9
USE1YGL098W ZWF1P11412 505 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W ENA1P13587 1091 aa3.18□□□□□ -1.9
USE1YGL098W MET16P18408 261 aaPredicted RBP3.18□□□□□ -1.9
USE1YGL098W CCA1P21269 546 aa3.18□□□□□ -1.9
USE1YGL098W APA2P22108 325 aa3.18□□□□□ -1.9
USE1YGL098W RPS1BP23248 255 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W HCM1P25364 564 aa3.18□□□□□ -1.9
USE1YGL098W YCL049CP25577 312 aa3.18□□□□□ -1.9
USE1YGL098W YCR101CP25607 182 aa3.18□□□□□ -1.9
USE1YGL098W DAL80P26343 269 aa3.18□□□□□ -1.9
USE1YGL098W UBC8P28263 218 aa3.18□□□□□ -1.9
USE1YGL098W FUN26P31381 517 aa3.18□□□□□ -1.9
USE1YGL098W NDI1P32340 513 aa3.18□□□□□ -1.9
USE1YGL098W COQ2P32378 372 aa3.18□□□□□ -1.9
USE1YGL098W KRE6P32486 720 aa3.18□□□□□ -1.9
USE1YGL098W AEP1P32493 518 aa3.18□□□□□ -1.9
USE1YGL098W PUB1P32588 453 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
USE1YGL098W PET127P32606 800 aa3.18□□□□□ -1.9
USE1YGL098W RGT1P32862 1170 aa3.18□□□□□ -1.9
USE1YGL098W BEM3P32873 1128 aa3.18□□□□□ -1.9
USE1YGL098W LIP5P32875 414 aa3.18□□□□□ -1.9
USE1YGL098W RPS1AP33442 255 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W HIS7P33734 552 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W SEA4P38164 1038 aa3.18□□□□□ -1.9
USE1YGL098W EXO5P38289 585 aa3.18□□□□□ -1.9
USE1YGL098W PEX32P38292 413 aa3.18□□□□□ -1.9
USE1YGL098W YBR238CP38330 731 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W BSD2P38356 321 aa3.18□□□□□ -1.9
USE1YGL098W RRP3P38712 501 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W NSG1P38837 291 aa3.18□□□□□ -1.9
USE1YGL098W YHR182WP38870 785 aa3.18□□□□□ -1.9
USE1YGL098W HRB1P38922 454 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
USE1YGL098W IPT1P38954 527 aa3.18□□□□□ -1.9
USE1YGL098W MNN1P39106 762 aa3.18□□□□□ -1.9
USE1YGL098W MXR1P40029 184 aa3.18□□□□□ -1.9
USE1YGL098W PEP8P40335 379 aa3.18□□□□□ -1.9
USE1YGL098W CTR1P49573 406 aa3.18□□□□□ -1.9
USE1YGL098W BIO3P50277 480 aa3.18□□□□□ -1.9
USE1YGL098W SUT1P53032 299 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W RTA1P53047 317 aa3.18□□□□□ -1.9
USE1YGL098W JAC1P53193 184 aa3.18□□□□□ -1.9
USE1YGL098W NQM1P53228 333 aaPredicted RBP3.18□□□□□ -1.9
USE1YGL098W ART5P53244 586 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W ARE2P53629 642 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W MNT4P53745 580 aa3.18□□□□□ -1.9
USE1YGL098W YNR062CP53748 327 aa3.18□□□□□ -1.9
USE1YGL098W FOL1P53848 824 aa3.18□□□□□ -1.9
USE1YGL098W YNL033WP53964 284 aa3.18□□□□□ -1.9
USE1YGL098W YNL019CP53975 284 aa3.18□□□□□ -1.9
USE1YGL098W YNL010WP53981 241 aaKnown RBP3.18□□□□□ -1.9
USE1YGL098W VPS9P54787 451 aa3.18□□□□□ -1.9
USE1YGL098W YCL001W-AP87012 153 aa3.18□□□□□ -1.9
USE1YGL098W ENA2Q01896 1091 aa3.18□□□□□ -1.9
USE1YGL098W SMA1Q02651 245 aa3.18□□□□□ -1.9
USE1YGL098W CWC27Q02770 301 aa3.18□□□□□ -1.9
USE1YGL098W IRC4Q03036 179 aa3.18□□□□□ -1.9
USE1YGL098W PRM15Q03262 622 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms