RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	WHI2	P12611	486 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	AMD1	P15274	810 aa	Known RBP	4.12	□□□□□ -1.75
PMC1	YGL006W	FPS1	P23900	669 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	EMC1	P25574	760 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	BIO2	P32451	375 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	GSH1	P32477	678 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	SEC61	P32915	480 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	YBR241C	P38142	488 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	SDH8	P38345	138 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	HSE1	P38753	452 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	YER156C	P40093	338 aa	Known RBP	4.12	□□□□□ -1.75
PMC1	YGL006W	ALR2	P43553	858 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	SRB7	P47822	140 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	MTR3	P48240	250 aa	Predicted RBP	4.12	□□□□□ -1.75
PMC1	YGL006W	TOF2	Q02208	771 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	YPL071C	Q02864	156 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	RRG7	Q08774	242 aa	Predicted RBP	4.12	□□□□□ -1.75
PMC1	YGL006W	NMD4	Q12129	218 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	SRN2	Q99176	213 aa		4.12	□□□□□ -1.75
PMC1	YGL006W	UBR1	P19812	1950 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	MSF1	P08425	469 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	IDP1	P21954	428 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	SGV1	P23293	657 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	VAM7	P32912	316 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YPT7	P32939	208 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	TGL1	P34163	548 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YKL100C	P34248	587 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	SNU114	P36048	1008 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	VPS51	P36116	164 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YHR033W	P38690	423 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	FHL1	P39521	936 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	SEC28	P40509	296 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	BST1	P43571	1029 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	ATG18	P43601	500 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	TOM22	P49334	152 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	PUS2	P53167	370 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	PET117	Q02771	107 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	FDC1	Q03034	503 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	EFR3	Q03653	782 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	YLR345W	Q06137	509 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	UPC2	Q12151	913 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	NSI1	Q12457	570 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	PET494	P07390	489 aa	Predicted RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	GAL3	P13045	520 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YIH1	P25637	258 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	APE2	P32454	952 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	PPQ1	P32945	549 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	MKS1	P34072	584 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	MNN2	P38069	597 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YHR035W	P38769	630 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	OPT1	P40897	799 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	PHB1	P40961	287 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	LSB6	P42951	607 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	SSY5	P47002	699 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	ECM27	P47144	725 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	DAM1	P53267	343 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	HEL2	Q05580	639 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	UAF30	Q08747	228 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YAH1	Q12184	172 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	MAM3	Q12296	706 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YDL199C	Q12407	687 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YPR1	Q12458	312 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	RIF1	P29539	1916 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	ALG7	P07286	448 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	YPK1	P12688	680 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	FRS1	P15624	595 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	RAM1	P22007	431 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	RBK1	P25332	333 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	NAM9	P27929	486 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	PMI40	P29952	429 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	CAT2	P32796	670 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	YKL077W	P36081	392 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	DRE2	P36152	348 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	MDM31	P38880	579 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
PMC1	YGL006W	FMP52	P40008	231 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	RGI2	P40188	164 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	FKH2	P41813	862 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	CSN12	P47130	423 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	SSN8	P47821	323 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	MRH4	P53166	561 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	ATF2	P53296	535 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	SMA1	Q02651	245 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	HBT1	Q07653	1046 aa	Known RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	YLR031W	Q07978	186 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	RCL1	Q08096	367 aa	Predicted RBP	4.11	□□□□□ -1.75
PMC1	YGL006W	THP1	Q08231	455 aa		4.11	□□□□□ -1.75
PMC1	YGL006W	PMD1	P32634	1753 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	CDC4	P07834	779 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	SPT14	P32363	452 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	PXA2	P34230	853 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	YBR056W	P38081	501 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	IFA38	P38286	347 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	GID8	P40208	455 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	YNL108C	P53929	270 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	SPO20	Q04359	397 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	MTR10	Q99189	972 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	CMP2	P14747	604 aa		4.1	□□□□□ -1.75
PMC1	YGL006W	MAG1	P22134	296 aa	Known RBP	4.1	□□□□□ -1.75
PMC1	YGL006W	RNA14	P25298	677 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms