RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W PEP5P12868 1029 aa4.01□□□□□ -1.77
UBP6YFR010W SPO7P18410 259 aa4.01□□□□□ -1.77
UBP6YFR010W COQ1P18900 473 aa4.01□□□□□ -1.77
UBP6YFR010W YIH1P25637 258 aa4.01□□□□□ -1.77
UBP6YFR010W RPS7AP26786 190 aaKnown RBP4.01□□□□□ -1.77
UBP6YFR010W PSO2P30620 661 aa4.01□□□□□ -1.77
UBP6YFR010W PET127P32606 800 aa4.01□□□□□ -1.77
UBP6YFR010W IMP3P32899 183 aaPredicted RBP4.01□□□□□ -1.77
UBP6YFR010W YKL071WP36086 256 aa4.01□□□□□ -1.77
UBP6YFR010W YMR262WP38430 313 aa4.01□□□□□ -1.77
UBP6YFR010W FAD1P38913 306 aa4.01□□□□□ -1.77
UBP6YFR010W VFA1P40080 203 aa4.01□□□□□ -1.77
UBP6YFR010W NDC80P40460 691 aa4.01□□□□□ -1.77
UBP6YFR010W CIN1P40987 1014 aa4.01□□□□□ -1.77
UBP6YFR010W YHC3P47040 408 aa4.01□□□□□ -1.77
UBP6YFR010W TAH11P47112 604 aa4.01□□□□□ -1.77
UBP6YFR010W MTR3P48240 250 aaPredicted RBP4.01□□□□□ -1.77
UBP6YFR010W CTR1P49573 406 aa4.01□□□□□ -1.77
UBP6YFR010W SLI1P53304 468 aa4.01□□□□□ -1.77
UBP6YFR010W SSU72P53538 206 aaPredicted RBP4.01□□□□□ -1.77
UBP6YFR010W YNL181WP53878 407 aa4.01□□□□□ -1.77
UBP6YFR010W BOP3P53958 396 aa4.01□□□□□ -1.77
UBP6YFR010W SKO1Q02100 647 aa4.01□□□□□ -1.77
UBP6YFR010W INA17Q02888 182 aa4.01□□□□□ -1.77
UBP6YFR010W RCR2Q03446 210 aaKnown RBP4.01□□□□□ -1.77
UBP6YFR010W RPC11Q04307 110 aaPredicted RBP4.01□□□□□ -1.77
UBP6YFR010W APC4Q04601 652 aa4.01□□□□□ -1.77
UBP6YFR010W YLR283WQ05867 314 aa4.01□□□□□ -1.77
UBP6YFR010W AIM6Q07716 390 aa4.01□□□□□ -1.77
UBP6YFR010W RTT109Q07794 436 aa4.01□□□□□ -1.77
UBP6YFR010W FRE3Q08905 711 aa4.01□□□□□ -1.77
UBP6YFR010W MDM20Q12387 796 aaKnown RBP4.01□□□□□ -1.77
UBP6YFR010W ATG31Q12421 196 aa4.01□□□□□ -1.77
UBP6YFR010W DCP1Q12517 231 aaPredicted RBP4.01□□□□□ -1.77
UBP6YFR010W PNO1Q99216 274 aaKnown RBP4.01□□□□□ -1.77
UBP6YFR010W RAD9P14737 1309 aa4.01□□□□□ -1.77
UBP6YFR010W LEU4P06208 619 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W NHP6BP11633 99 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W HMG2P12684 1045 aa4□□□□□ -1.77
UBP6YFR010W VPS33P20795 691 aa4□□□□□ -1.77
UBP6YFR010W CMK2P22517 447 aa4□□□□□ -1.77
UBP6YFR010W VPS34P22543 875 aa4□□□□□ -1.77
UBP6YFR010W DAL2P25335 343 aa4□□□□□ -1.77
UBP6YFR010W ADH7P25377 361 aa4□□□□□ -1.77
UBP6YFR010W RHB1P25378 209 aa4□□□□□ -1.77
UBP6YFR010W PBN1P25580 416 aa4□□□□□ -1.77
UBP6YFR010W ADE1P27616 306 aa4□□□□□ -1.77
UBP6YFR010W PRP45P28004 379 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W CWP1P28319 239 aa4□□□□□ -1.77
UBP6YFR010W PMI40P29952 429 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W TIF3P34167 436 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W TCD2P36101 447 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W SIC1P38634 284 aa4□□□□□ -1.77
UBP6YFR010W RSM25P40496 264 aa4□□□□□ -1.77
UBP6YFR010W ERG10P41338 398 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W IME4P41833 600 aa4□□□□□ -1.77
UBP6YFR010W BIT61P47041 543 aa4□□□□□ -1.77
UBP6YFR010W YGL036WP53185 909 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W VOA1P53262 265 aa4□□□□□ -1.77
UBP6YFR010W PXR1P53335 271 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W VPS60Q03390 229 aa4□□□□□ -1.77
UBP6YFR010W CAB5Q03941 241 aa4□□□□□ -1.77
UBP6YFR010W MSL5Q12186 476 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
UBP6YFR010W INP53Q12271 1107 aa4□□□□□ -1.77
UBP6YFR010W YLL067CQ07888 1374 aa4□□□□□ -1.77
UBP6YFR010W ARD1P07347 238 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W URA4P20051 364 aa4□□□□□ -1.77
UBP6YFR010W ZRC1P20107 442 aa4□□□□□ -1.77
UBP6YFR010W CIN8P27895 1000 aa4□□□□□ -1.77
UBP6YFR010W GCD7P32502 381 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W TUL1P36096 758 aa4□□□□□ -1.77
UBP6YFR010W CHK1P38147 527 aa4□□□□□ -1.77
UBP6YFR010W HRB1P38922 454 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
UBP6YFR010W SEC72P39742 193 aaKnown RBP4□□□□□ -1.77
UBP6YFR010W PIG2P40187 538 aa4□□□□□ -1.77
UBP6YFR010W TOS3P43637 560 aa4□□□□□ -1.77
UBP6YFR010W SSY5P47002 699 aa4□□□□□ -1.77
UBP6YFR010W MSE1P48525 536 aa4□□□□□ -1.77
UBP6YFR010W KAP114P53067 1004 aa4□□□□□ -1.77
UBP6YFR010W YPL108WQ02872 168 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W YLR040CQ07988 224 aa4□□□□□ -1.77
UBP6YFR010W REX4Q08237 289 aa4□□□□□ -1.77
UBP6YFR010W GPN2Q08726 347 aaPredicted RBP4□□□□□ -1.77
UBP6YFR010W BTS1Q12051 335 aa4□□□□□ -1.77
UBP6YFR010W NCB2Q92317 146 aa4□□□□□ -1.77
UBP6YFR010W CDC21P06785 304 aa3.99□□□□□ -1.77
UBP6YFR010W ILV2P07342 687 aaKnown RBP3.99□□□□□ -1.77
UBP6YFR010W TUB3P09734 445 aaKnown RBP3.99□□□□□ -1.77
UBP6YFR010W MATALPHA1P0CY06 175 aa3.99□□□□□ -1.77
UBP6YFR010W HMLALPHA1P0CY07 175 aa3.99□□□□□ -1.77
UBP6YFR010W SEC12P11655 471 aa3.99□□□□□ -1.77
UBP6YFR010W POL30P15873 258 aaKnown RBP3.99□□□□□ -1.77
UBP6YFR010W SAR1P20606 190 aaKnown RBP3.99□□□□□ -1.77
UBP6YFR010W MGR1P25573 417 aa3.99□□□□□ -1.77
UBP6YFR010W PEX3P28795 441 aa3.99□□□□□ -1.77
UBP6YFR010W RPD3P32561 433 aa3.99□□□□□ -1.77
UBP6YFR010W NUF2P33895 451 aa3.99□□□□□ -1.77
UBP6YFR010W ZTA1P38230 334 aaKnown RBP3.99□□□□□ -1.77
UBP6YFR010W ERG7P38604 731 aa3.99□□□□□ -1.77
UBP6YFR010W FHL1P39521 936 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms