RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	EGD1	Q02642	157 aa	Known RBP	5.31	□□□□□ -1.56
VTC2	YFL004W	OYE2	Q03558	400 aa	Known RBP	5.31	□□□□□ -1.56
VTC2	YFL004W	TY1A-DR1	Q03856	440 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	TY1A-ML1	Q04706	440 aa	Known RBP	5.31	□□□□□ -1.56
VTC2	YFL004W	UBX5	Q06682	500 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	LAP2	Q10740	671 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	TY1A-BR	Q12217	440 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	SVS1	Q12254	260 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	NYV1	Q12255	253 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	TY1A-NL2	Q12470	440 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	TY1A-GR2	Q12485	440 aa		5.31	□□□□□ -1.56
VTC2	YFL004W	SUC2	P00724	532 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	GCN4	P03069	281 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	FUR4	P05316	633 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	MER1	P16523	270 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	APA2	P22108	325 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	PGS1	P25578	521 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	YCR015C	P25616	317 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	COQ2	P32378	372 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	RIM1	P32445	135 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	LYP1	P32487	611 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	CDC13	P32797	924 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	APT2	P36973	181 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	SIF2	P38262	535 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
VTC2	YFL004W	PRM2	P40534	656 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	THI12	P42883	340 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	THI5	P43534	340 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	THI11	P47183	340 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	JAC1	P53193	184 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	HHO1	P53551	258 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	REG1	Q00816	1014 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	MTD1	Q02046	320 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	TOF2	Q02208	771 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	NHP10	Q03435	203 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	SUE1	Q06524	206 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	PUN1	Q06991	263 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	ATG20	Q07528	640 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	THI13	Q07748	340 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	DCN1	Q12395	269 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	DFG16	Q99234	619 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	RPP1A	P05318	106 aa	Predicted RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	CDC42	P19073	191 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	PRP28	P23394	588 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	SAT4	P25333	603 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	RHB1	P25378	209 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	GID7	P25569	745 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	BEM3	P32873	1128 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	MKS1	P34072	584 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	AHP1	P38013	176 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	MBA1	P38300	278 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	RIM11	P38615	370 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	YAR028W	P39548	234 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	RPN3	P40016	523 aa	Known RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	VRG4	P40107	337 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	DOT5	P40553	215 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	AAD14	P42884	376 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	NQM1	P53228	333 aa	Predicted RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	PEX13	P80667	386 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	RMI1	Q02685	241 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	AIM36	Q03798	255 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	MHR1	Q06630	226 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	KEL3	Q08979	651 aa	Predicted RBP	5.3	□□□□□ -1.56
VTC2	YFL004W	CMC2	Q3E7A4	109 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	SAS5	Q99314	248 aa		5.3	□□□□□ -1.56
VTC2	YFL004W	ARG3	P05150	338 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	RAD52	P06778	471 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	LAT1	P12695	482 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	HPR1	P17629	752 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	ERG9	P29704	444 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	FUN30	P31380	1131 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	ARP2	P32381	391 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	PET127	P32606	800 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	ASK1	P35734	292 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	CCZ1	P38273	704 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	MSC7	P38694	644 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	VPS45	P38932	577 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	QDR1	P40475	563 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	CIN1	P40987	1014 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	PRP24	P49960	444 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	YNR068C	P53754	272 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	SLM2	P53955	656 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	STP1	Q00947	519 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	ELP3	Q02908	557 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	CSN9	Q03981	162 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	DOT1	Q04089	582 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	ASR1	Q06834	288 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	YPL199C	Q08954	240 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	YOR283W	Q12040	230 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	YLL056C	Q12177	298 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	YGL194C-A	Q2V2P6	80 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	TIM9	O74700	87 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	TRP3	P00937	484 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	REP2	P03872	296 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	PWP2	P25635	923 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	VAM7	P32912	316 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
VTC2	YFL004W	YKR051W	P36142	418 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	APN2	P38207	520 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	LNP1	P38878	278 aa		5.29	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms