RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C ERG6P25087 383 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C CTR86P25355 563 aa5.54□□□□□ -1.52
SEC20YDR498C SEC17P32602 292 aa5.54□□□□□ -1.52
SEC20YDR498C COX13P32799 129 aa5.54□□□□□ -1.52
SEC20YDR498C YPT52P36018 234 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C RIB1P38066 345 aa5.54□□□□□ -1.52
SEC20YDR498C BMT2P38278 337 aa5.54□□□□□ -1.52
SEC20YDR498C TAE1P38340 232 aa5.54□□□□□ -1.52
SEC20YDR498C YBR285WP38354 144 aa5.54□□□□□ -1.52
SEC20YDR498C YEL020CP39994 560 aa5.54□□□□□ -1.52
SEC20YDR498C YER034WP40022 185 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C LSM5P40089 93 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C MPH1P40562 993 aa5.54□□□□□ -1.52
SEC20YDR498C ARF3P40994 183 aaRIP-Chip data5.54□□□□□ -1.52not detected
SEC20YDR498C GAB1P41733 394 aa5.54□□□□□ -1.52
SEC20YDR498C MUP1P50276 574 aa5.54□□□□□ -1.52
SEC20YDR498C YGL108CP53139 140 aa5.54□□□□□ -1.52
SEC20YDR498C MPS2P53159 387 aa5.54□□□□□ -1.52
SEC20YDR498C TDA7P53882 636 aaPredicted RBP5.54□□□□□ -1.52
SEC20YDR498C IGO1P53897 168 aa5.54□□□□□ -1.52
SEC20YDR498C MET31Q03081 177 aa5.54□□□□□ -1.52
SEC20YDR498C EFR3Q03653 782 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C VHS1Q03785 461 aa5.54□□□□□ -1.52
SEC20YDR498C EAF1Q06337 982 aa5.54□□□□□ -1.52
SEC20YDR498C TGL5Q12043 749 aa5.54□□□□□ -1.52
SEC20YDR498C RRP42Q12277 265 aaPredicted RBP5.54□□□□□ -1.52
SEC20YDR498C NTO1Q12311 748 aa5.54□□□□□ -1.52
SEC20YDR498C WTM1Q12363 437 aaKnown RBP5.54□□□□□ -1.52
SEC20YDR498C THP2O13539 261 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C RAS2P01120 322 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C COR1P07256 457 aa5.53□□□□□ -1.52
SEC20YDR498C CPA1P07258 411 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C ALG7P07286 448 aa5.53□□□□□ -1.52
SEC20YDR498C HAP4P14064 554 aa5.53□□□□□ -1.52
SEC20YDR498C PRI2P20457 528 aa5.53□□□□□ -1.52
SEC20YDR498C MRPS28P21771 286 aa5.53□□□□□ -1.52
SEC20YDR498C PHO84P25297 587 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C SLM5P25345 492 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C TRX3P25372 127 aa5.53□□□□□ -1.52
SEC20YDR498C POL4P25615 582 aa5.53□□□□□ -1.52
SEC20YDR498C CYS4P32582 507 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C MGM101P32787 269 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C MDJ1P35191 511 aa5.53□□□□□ -1.52
SEC20YDR498C CBP4P37267 147 aa5.53□□□□□ -1.52
SEC20YDR498C YBR071WP38243 211 aa5.53□□□□□ -1.52
SEC20YDR498C OSH7P38755 437 aa5.53□□□□□ -1.52
SEC20YDR498C YHR127WP38833 243 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C TDA11P38854 504 aa5.53□□□□□ -1.52
SEC20YDR498C BEM4P39011 633 aa5.53□□□□□ -1.52
SEC20YDR498C RSP5P39940 809 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C TY4A-JP47023 414 aa5.53□□□□□ -1.52
SEC20YDR498C AIM22P47051 409 aa5.53□□□□□ -1.52
SEC20YDR498C YJR030CP47101 745 aa5.53□□□□□ -1.52
SEC20YDR498C YJR149WP47177 404 aa5.53□□□□□ -1.52
SEC20YDR498C UPF3P48412 387 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C KEL2P50090 882 aa5.53□□□□□ -1.52
SEC20YDR498C BIO3P50277 480 aa5.53□□□□□ -1.52
SEC20YDR498C ARE2P53629 642 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C YNL095CP53932 642 aa5.53□□□□□ -1.52
SEC20YDR498C SFB2P53953 876 aa5.53□□□□□ -1.52
SEC20YDR498C IDP3P53982 420 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C MMT1Q03218 510 aa5.53□□□□□ -1.52
SEC20YDR498C YMR010WQ03687 405 aa5.53□□□□□ -1.52
SEC20YDR498C ARX1Q03862 593 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C YDR179W-AQ03983 463 aa5.53□□□□□ -1.52
SEC20YDR498C PFA4Q12006 378 aa5.53□□□□□ -1.52
SEC20YDR498C YPR011CQ12251 326 aa5.53□□□□□ -1.52
SEC20YDR498C RPN6Q12377 434 aa5.53□□□□□ -1.52
SEC20YDR498C DBP10Q12389 995 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C NSI1Q12457 570 aa5.53□□□□□ -1.52
SEC20YDR498C PFK27Q12471 397 aaPredicted RBP5.53□□□□□ -1.52
SEC20YDR498C Q0182Q9ZZW1 134 aa5.53□□□□□ -1.52
SEC20YDR498C BRR2P32639 2163 aaKnown RBP5.53□□□□□ -1.52
SEC20YDR498C YPR096CO13587 100 aa5.52□□□□□ -1.53
SEC20YDR498C TIM9O74700 87 aa5.52□□□□□ -1.53
SEC20YDR498C RAD7P06779 565 aa5.52□□□□□ -1.53
SEC20YDR498C UNG1P12887 359 aa5.52□□□□□ -1.53
SEC20YDR498C CMK2P22517 447 aa5.52□□□□□ -1.53
SEC20YDR498C DMC1P25453 334 aa5.52□□□□□ -1.53
SEC20YDR498C PPZ1P26570 692 aa5.52□□□□□ -1.53
SEC20YDR498C AAR2P32357 355 aaPredicted RBP5.52□□□□□ -1.53
SEC20YDR498C TIF3P34167 436 aaKnown RBP5.52□□□□□ -1.53
SEC20YDR498C AHP1P38013 176 aaKnown RBP5.52□□□□□ -1.53
SEC20YDR498C INM1P38710 295 aa5.52□□□□□ -1.53
SEC20YDR498C WSC4P38739 605 aa5.52□□□□□ -1.53
SEC20YDR498C NEM1P38757 446 aa5.52□□□□□ -1.53
SEC20YDR498C GGC1P38988 300 aa5.52□□□□□ -1.53
SEC20YDR498C OSW5P40219 148 aa5.52□□□□□ -1.53
SEC20YDR498C PDS1P40316 373 aaPredicted RBP5.52□□□□□ -1.53
SEC20YDR498C YJL070CP40361 888 aa5.52□□□□□ -1.53
SEC20YDR498C MPM1P40364 252 aa5.52□□□□□ -1.53
SEC20YDR498C LAS21P40367 830 aa5.52□□□□□ -1.53
SEC20YDR498C YRB2P40517 327 aa5.52□□□□□ -1.53
SEC20YDR498C ELP2P42935 788 aa5.52□□□□□ -1.53
SEC20YDR498C SGF73P53165 657 aa5.52□□□□□ -1.53
SEC20YDR498C HXT15P54854 567 aa5.52□□□□□ -1.53
SEC20YDR498C SPO19Q03029 223 aa5.52□□□□□ -1.53
SEC20YDR498C YDR239CQ03780 787 aa5.52□□□□□ -1.53
SEC20YDR498C ARR1Q06596 294 aa5.52□□□□□ -1.53
SEC20YDR498C DTD1Q07648 150 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms