RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C SEC7P11075 2009 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C NUP192P47054 1683 aa0.8□□□□□ -2.28
SEC1YDR164C DOP1Q03921 1698 aa0.8□□□□□ -2.28
SEC1YDR164C CDC8P00572 216 aa0.8□□□□□ -2.28
SEC1YDR164C GCN4P03069 281 aa0.8□□□□□ -2.28
SEC1YDR164C SEC53P07283 254 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C CKA1P15790 372 aa0.8□□□□□ -2.28
SEC1YDR164C THR4P16120 514 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C FUR1P18562 216 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C ART10P18634 518 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C OPI1P21957 404 aa0.8□□□□□ -2.28
SEC1YDR164C YSP3P25036 478 aa0.8□□□□□ -2.28
SEC1YDR164C LRE1P25579 583 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C RFA2P26754 273 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C RPC19P28000 142 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C LAC1P28496 418 aa0.8□□□□□ -2.28
SEC1YDR164C SWI3P32591 825 aa0.8□□□□□ -2.28
SEC1YDR164C TFC3P34111 1160 aa0.8□□□□□ -2.28
SEC1YDR164C BYE1P36106 594 aa0.8□□□□□ -2.28
SEC1YDR164C HEL1P36113 551 aa0.8□□□□□ -2.28
SEC1YDR164C YBR062CP38239 180 aa0.8□□□□□ -2.28
SEC1YDR164C FZO1P38297 855 aa0.8□□□□□ -2.28
SEC1YDR164C TCD1P38756 429 aa0.8□□□□□ -2.28
SEC1YDR164C MTC6P38849 526 aa0.8□□□□□ -2.28
SEC1YDR164C RTS1P38903 757 aa0.8□□□□□ -2.28
SEC1YDR164C SMC2P38989 1170 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C CCT6P39079 546 aa0.8□□□□□ -2.28
SEC1YDR164C FLC2P39719 783 aa0.8□□□□□ -2.28
SEC1YDR164C SLZ1P40167 298 aa0.8□□□□□ -2.28
SEC1YDR164C SEC24P40482 926 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C SHQ1P40486 507 aaPredicted RBP0.8□□□□□ -2.28
SEC1YDR164C VMA13P41807 478 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C IME4P41833 600 aa0.8□□□□□ -2.28
SEC1YDR164C LCL3P53153 274 aa0.8□□□□□ -2.28
SEC1YDR164C YGR079WP53249 370 aa0.8□□□□□ -2.28
SEC1YDR164C JJJ1P53863 590 aa0.8□□□□□ -2.28
SEC1YDR164C REX2P54964 269 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C MTG1Q03151 367 aaPredicted RBP0.8□□□□□ -2.28
SEC1YDR164C CTL1Q03220 320 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C YMR155WQ03795 547 aa0.8□□□□□ -2.28
SEC1YDR164C YDR131CQ03899 556 aa0.8□□□□□ -2.28
SEC1YDR164C SXM1Q04175 944 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C GTB1Q04924 702 aa0.8□□□□□ -2.28
SEC1YDR164C YLR345WQ06137 509 aa0.8□□□□□ -2.28
SEC1YDR164C YLR455WQ06188 304 aa0.8□□□□□ -2.28
SEC1YDR164C VAC14Q06708 880 aa0.8□□□□□ -2.28
SEC1YDR164C SHS1Q07657 551 aa0.8□□□□□ -2.28
SEC1YDR164C YPL272CQ08984 517 aa0.8□□□□□ -2.28
SEC1YDR164C YPL150WQ12152 901 aa0.8□□□□□ -2.28
SEC1YDR164C NBP2Q12163 236 aa0.8□□□□□ -2.28
SEC1YDR164C EMP46Q12396 444 aa0.8□□□□□ -2.28
SEC1YDR164C RTN2Q12443 393 aa0.8□□□□□ -2.28
SEC1YDR164C RRD2Q12461 358 aa0.8□□□□□ -2.28
SEC1YDR164C ARP6Q12509 438 aa0.8□□□□□ -2.28
SEC1YDR164C YOL159C-AQ3E769 90 aa0.8□□□□□ -2.28
SEC1YDR164C YBR255C-AQ3E776 120 aa0.8□□□□□ -2.28
SEC1YDR164C APC1P53886 1748 aa0.8□□□□□ -2.28
SEC1YDR164C GCN2P15442 1659 aa0.8□□□□□ -2.28
SEC1YDR164C ADE4P04046 510 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C RPO21P04050 1733 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C RPL24AP04449 155 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C CDC33P07260 213 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C RPL4AP10664 362 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C CBS1P14066 229 aa0.8□□□□□ -2.28
SEC1YDR164C VMA2P16140 517 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C SRP54P20424 541 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C PRE8P23639 250 aa0.8□□□□□ -2.28
SEC1YDR164C RAD57P25301 460 aa0.8□□□□□ -2.28
SEC1YDR164C DAL2P25335 343 aa0.8□□□□□ -2.28
SEC1YDR164C OCA4P25366 362 aa0.8□□□□□ -2.28
SEC1YDR164C RRT12P25381 491 aa0.8□□□□□ -2.28
SEC1YDR164C POL4P25615 582 aa0.8□□□□□ -2.28
SEC1YDR164C PRR1P28708 518 aa0.8□□□□□ -2.28
SEC1YDR164C ZIP1P31111 875 aa0.8□□□□□ -2.28
SEC1YDR164C HXT3P32466 567 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C EFB1P32471 206 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C MEI5P32489 222 aa0.8□□□□□ -2.28
SEC1YDR164C SRB5P32585 307 aa0.8□□□□□ -2.28
SEC1YDR164C PDR3P33200 976 aa0.8□□□□□ -2.28
SEC1YDR164C RPT5P33297 434 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C BMH2P34730 273 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C MYO3P36006 1272 aa0.8□□□□□ -2.28
SEC1YDR164C RPC37P36121 282 aa0.8□□□□□ -2.28
SEC1YDR164C LAS1P36146 502 aaPredicted RBP0.8□□□□□ -2.28
SEC1YDR164C MRX3P38172 270 aa0.8□□□□□ -2.28
SEC1YDR164C YBL029WP38201 376 aa0.8□□□□□ -2.28
SEC1YDR164C HIS2P38635 335 aa0.8□□□□□ -2.28
SEC1YDR164C LRP1P38801 184 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C APE4P38821 490 aa0.8□□□□□ -2.28
SEC1YDR164C AVT2P39981 480 aa0.8□□□□□ -2.28
SEC1YDR164C RGI2P40188 164 aa0.8□□□□□ -2.28
SEC1YDR164C PRE5P40302 234 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C YIL161WP40449 235 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C MET18P40469 1032 aa0.8□□□□□ -2.28
SEC1YDR164C SGN1P40561 250 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
SEC1YDR164C RTS2P40962 232 aa0.8□□□□□ -2.28
SEC1YDR164C ARF3P40994 183 aaRIP-Chip data0.8□□□□□ -2.28not detected
SEC1YDR164C SEC27P41811 889 aaKnown RBP0.8□□□□□ -2.28
SEC1YDR164C SWP82P43554 623 aa0.8□□□□□ -2.28
SEC1YDR164C YFL040WP43562 540 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms