RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C KAR3P17119 729 aa1.35□□□□□ -2.19
SSS1YDR086C SAM2P19358 384 aaKnown RBP1.35□□□□□ -2.19
SSS1YDR086C POL4P25615 582 aa1.35□□□□□ -2.19
SSS1YDR086C ATP11P32453 318 aa1.35□□□□□ -2.19
SSS1YDR086C ARA1P38115 344 aa1.35□□□□□ -2.19
SSS1YDR086C RIB5P38145 238 aa1.35□□□□□ -2.19
SSS1YDR086C MUM2P38236 366 aa1.35□□□□□ -2.19
SSS1YDR086C CCT6P39079 546 aa1.35□□□□□ -2.19
SSS1YDR086C ISC1P40015 477 aaKnown RBP1.35□□□□□ -2.19
SSS1YDR086C IPI3P53877 555 aa1.35□□□□□ -2.19
SSS1YDR086C ECM11Q04110 302 aa1.35□□□□□ -2.19
SSS1YDR086C IES4Q08561 116 aa1.35□□□□□ -2.19
SSS1YDR086C CTI6Q08923 506 aa1.35□□□□□ -2.19
SSS1YDR086C SPE4Q12455 300 aa1.35□□□□□ -2.19
SSS1YDR086C NOP58Q12499 511 aaKnown RBP1.35□□□□□ -2.19
SSS1YDR086C RAV1P47104 1357 aa1.34□□□□□ -2.19
SSS1YDR086C COR1P07256 457 aa1.34□□□□□ -2.19
SSS1YDR086C NFT1P0CE68 1218 aa1.34□□□□□ -2.19
SSS1YDR086C RPS8AP0CX39 200 aaKnown RBP1.34□□□□□ -2.19
SSS1YDR086C RPS8BP0CX40 200 aaKnown RBP1.34□□□□□ -2.19
SSS1YDR086C ELO2P25358 347 aa1.34□□□□□ -2.19
SSS1YDR086C GYP6P32806 458 aa1.34□□□□□ -2.19
SSS1YDR086C MRPS9P38120 278 aa1.34□□□□□ -2.19
SSS1YDR086C CHK1P38147 527 aa1.34□□□□□ -2.19
SSS1YDR086C MBB1P39534 108 aa1.34□□□□□ -2.19
SSS1YDR086C UTP18P40362 594 aaPredicted RBP1.34□□□□□ -2.19
SSS1YDR086C POP1P41812 875 aa1.34□□□□□ -2.19
SSS1YDR086C TRS85P46944 698 aa1.34□□□□□ -2.19
SSS1YDR086C YJR085CP47131 105 aaKnown RBP1.34□□□□□ -2.19
SSS1YDR086C MTM1P53320 366 aa1.34□□□□□ -2.19
SSS1YDR086C IOC4Q04213 475 aa1.34□□□□□ -2.19
SSS1YDR086C MRD1Q06106 887 aaKnown RBP1.34□□□□□ -2.19
SSS1YDR086C BI3Q9ZZW7 517 aa1.34□□□□□ -2.19
SSS1YDR086C EST1P17214 699 aaPredicted RBP1.33□□□□□ -2.2
SSS1YDR086C POP5P28005 173 aa1.33□□□□□ -2.2
SSS1YDR086C BMT2P38278 337 aa1.33□□□□□ -2.2
SSS1YDR086C DPH1P40487 425 aaKnown RBP1.33□□□□□ -2.2
SSS1YDR086C DFG10P40526 253 aa1.33□□□□□ -2.2
SSS1YDR086C SYG1P40528 902 aa1.33□□□□□ -2.2
SSS1YDR086C LAM5P43560 674 aa1.33□□□□□ -2.2
SSS1YDR086C BRO1P48582 844 aa1.33□□□□□ -2.2
SSS1YDR086C SLG1P54867 378 aa1.33□□□□□ -2.2
SSS1YDR086C AIM32Q04689 311 aa1.33□□□□□ -2.2
SSS1YDR086C YEH1Q07804 573 aa1.33□□□□□ -2.2
SSS1YDR086C YPQ1Q12010 308 aa1.33□□□□□ -2.2
SSS1YDR086C PKH2Q12236 1081 aaKnown RBP1.33□□□□□ -2.2
SSS1YDR086C TRP1P00912 224 aa1.32□□□□□ -2.2
SSS1YDR086C YCK1P23291 538 aa1.32□□□□□ -2.2
SSS1YDR086C PRD1P25375 712 aa1.32□□□□□ -2.2
SSS1YDR086C TIP1P27654 210 aaPredicted RBP1.32□□□□□ -2.2
SSS1YDR086C CHS3P29465 1165 aa1.32□□□□□ -2.2
SSS1YDR086C NPL6P32832 435 aa1.32□□□□□ -2.2
SSS1YDR086C REC114P32841 428 aa1.32□□□□□ -2.2
SSS1YDR086C MRPL10P36520 322 aa1.32□□□□□ -2.2
SSS1YDR086C VID24P38263 362 aa1.32□□□□□ -2.2
SSS1YDR086C FLC2P39719 783 aa1.32□□□□□ -2.2
SSS1YDR086C CHS6P40955 746 aa1.32□□□□□ -2.2
SSS1YDR086C YGR066CP53242 292 aa1.32□□□□□ -2.2
SSS1YDR086C NCS2P53923 493 aaPredicted RBP1.32□□□□□ -2.2
SSS1YDR086C HXT11P54862 567 aa1.32□□□□□ -2.2
SSS1YDR086C PPM1Q04081 328 aa1.32□□□□□ -2.2
SSS1YDR086C RPC11Q04307 110 aaPredicted RBP1.32□□□□□ -2.2
SSS1YDR086C MFB1Q04922 465 aa1.32□□□□□ -2.2
SSS1YDR086C TIM18Q08749 192 aa1.32□□□□□ -2.2
SSS1YDR086C PLP2Q12017 286 aa1.32□□□□□ -2.2
SSS1YDR086C YBR126W-AQ8TGU7 68 aa1.32□□□□□ -2.2
SSS1YDR086C YPT6Q99260 215 aa1.32□□□□□ -2.2
SSS1YDR086C PEP3P27801 918 aa1.31□□□□□ -2.2
SSS1YDR086C KAR9P32526 644 aa1.31□□□□□ -2.2
SSS1YDR086C TCD2P36101 447 aaKnown RBP1.31□□□□□ -2.2
SSS1YDR086C SEO1P39709 593 aa1.31□□□□□ -2.2
SSS1YDR086C AIM10P39965 576 aaKnown RBP1.31□□□□□ -2.2
SSS1YDR086C IES5P40060 125 aa1.31□□□□□ -2.2
SSS1YDR086C IMD4P50094 524 aaKnown RBP1.31□□□□□ -2.2
SSS1YDR086C OCA1P50946 238 aaPredicted RBP1.31□□□□□ -2.2
SSS1YDR086C VMS1Q04311 632 aaKnown RBP1.31□□□□□ -2.2
SSS1YDR086C YKU80Q04437 629 aa1.31□□□□□ -2.2
SSS1YDR086C YPR091CQ06833 770 aa1.31□□□□□ -2.2
SSS1YDR086C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SSS1YDR086C NMD4Q12129 218 aa1.31□□□□□ -2.2
SSS1YDR086C RRD2Q12461 358 aa1.31□□□□□ -2.2
SSS1YDR086C AVL9Q12500 764 aa1.31□□□□□ -2.2
SSS1YDR086C TOP1P04786 769 aa1.3□□□□□ -2.2
SSS1YDR086C MUD1P32605 298 aaKnown RBP1.3□□□□□ -2.2
SSS1YDR086C YCR041WP37265 110 aa1.3□□□□□ -2.2
SSS1YDR086C REG2P38232 338 aa1.3□□□□□ -2.2
SSS1YDR086C LYS14P40971 790 aa1.3□□□□□ -2.2
SSS1YDR086C YIP1P53039 248 aa1.3□□□□□ -2.2
SSS1YDR086C NGL3Q03210 505 aa1.3□□□□□ -2.2
SSS1YDR086C YDR239CQ03780 787 aa1.3□□□□□ -2.2
SSS1YDR086C VPS38Q05919 439 aa1.3□□□□□ -2.2
SSS1YDR086C NDE2Q07500 545 aa1.3□□□□□ -2.2
SSS1YDR086C SGT1Q08446 395 aa1.3□□□□□ -2.2
SSS1YDR086C HUA2Q12134 243 aa1.3□□□□□ -2.2
SSS1YDR086C RLM1Q12224 676 aa1.3□□□□□ -2.2
SSS1YDR086C YJR112W-AQ3E743 109 aa1.3□□□□□ -2.2
SSS1YDR086C PSK1P31374 1356 aa1.3□□□□□ -2.2
SSS1YDR086C ARG4P04076 463 aaPredicted RBP1.29□□□□□ -2.2
SSS1YDR086C RHO2P06781 192 aa1.29□□□□□ -2.2
SSS1YDR086C RPL31BP0C2H9 113 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms