RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W YKT6P36015 200 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W STN1P38960 494 aa2.51□□□□□ -2.01
VPS41YDR080W ARB1P40024 610 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W SPG5P42933 373 aa2.51□□□□□ -2.01
VPS41YDR080W ARA2Q04212 335 aa2.51□□□□□ -2.01
VPS41YDR080W ATG10Q07879 167 aa2.51□□□□□ -2.01
VPS41YDR080W CMS1Q07897 291 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W PSR2Q07949 397 aa2.51□□□□□ -2.01
VPS41YDR080W TLG2Q08144 397 aa2.51□□□□□ -2.01
VPS41YDR080W GPM3Q12326 303 aa2.51□□□□□ -2.01
VPS41YDR080W YDR262WQ12331 272 aa2.51□□□□□ -2.01
VPS41YDR080W HIS1P00498 297 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W SCS2P40075 244 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W IST3P40565 148 aaPredicted RBP2.51□□□□□ -2.01
VPS41YDR080W SSU1P41930 458 aa2.51□□□□□ -2.01
VPS41YDR080W PSA1P41940 361 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W SNZ3P43545 298 aa2.51□□□□□ -2.01
VPS41YDR080W SNZ2P53824 298 aa2.51□□□□□ -2.01
VPS41YDR080W YNL247WP53852 767 aaKnown RBP2.51□□□□□ -2.01
VPS41YDR080W KTR6P54070 446 aa2.51□□□□□ -2.01
VPS41YDR080W RPL15BP54780 204 aaPredicted RBP2.51□□□□□ -2.01
VPS41YDR080W PEX25Q02969 394 aa2.51□□□□□ -2.01
VPS41YDR080W TRS31Q03337 283 aa2.51□□□□□ -2.01
VPS41YDR080W BIK1P11709 440 aa2.5□□□□□ -2.01
VPS41YDR080W SCH9P11792 824 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W APA1P16550 321 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W MET16P18408 261 aaPredicted RBP2.5□□□□□ -2.01
VPS41YDR080W PRP2P20095 876 aaPredicted RBP2.5□□□□□ -2.01
VPS41YDR080W CDC15P27636 974 aa2.5□□□□□ -2.01
VPS41YDR080W PSO2P30620 661 aa2.5□□□□□ -2.01
VPS41YDR080W CDC13P32797 924 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W MRPL15P36523 253 aa2.5□□□□□ -2.01
VPS41YDR080W SMF1P38925 575 aa2.5□□□□□ -2.01
VPS41YDR080W SEC24P40482 926 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W SAP185P40856 1058 aa2.5□□□□□ -2.01
VPS41YDR080W CIN1P40987 1014 aa2.5□□□□□ -2.01
VPS41YDR080W TCB2P48231 1178 aa2.5□□□□□ -2.01
VPS41YDR080W TDA9Q04545 1251 aa2.5□□□□□ -2.01
VPS41YDR080W AHA1Q12449 350 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W RRP12Q12754 1228 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W GCN1P33892 2672 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W YPR089WO13585 888 aa2.5□□□□□ -2.01
VPS41YDR080W YCP4P25349 247 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W RFA2P26754 273 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W SEF1P34228 1148 aa2.5□□□□□ -2.01
VPS41YDR080W DHH1P39517 506 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W BUD13P46947 266 aaPredicted RBP2.5□□□□□ -2.01
VPS41YDR080W SGF73P53165 657 aa2.5□□□□□ -2.01
VPS41YDR080W INA17Q02888 182 aa2.5□□□□□ -2.01
VPS41YDR080W GFD1Q04839 188 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W LEU9Q12166 604 aaKnown RBP2.5□□□□□ -2.01
VPS41YDR080W KAR1P11927 433 aa2.49□□□□□ -2.01
VPS41YDR080W YAP1P19880 650 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W UBA1P22515 1024 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W DAL2P25335 343 aa2.49□□□□□ -2.01
VPS41YDR080W ADH7P25377 361 aa2.49□□□□□ -2.01
VPS41YDR080W SEC1P30619 724 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W GSH1P32477 678 aa2.49□□□□□ -2.01
VPS41YDR080W YGR250CP53316 781 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W IDP3P53982 420 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W MPS1P54199 764 aa2.49□□□□□ -2.01
VPS41YDR080W VPS9P54787 451 aa2.49□□□□□ -2.01
VPS41YDR080W GTT2Q12390 233 aa2.49□□□□□ -2.01
VPS41YDR080W UBR1P19812 1950 aa2.49□□□□□ -2.01
VPS41YDR080W PAB1P04147 577 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
VPS41YDR080W MSH1P25846 959 aa2.49□□□□□ -2.01
VPS41YDR080W MKK1P32490 508 aa2.49□□□□□ -2.01
VPS41YDR080W KES1P35844 434 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W APD1P38281 316 aa2.49□□□□□ -2.01
VPS41YDR080W URA8P38627 578 aaPredicted RBP2.49□□□□□ -2.01
VPS41YDR080W DBP8P38719 431 aa2.49□□□□□ -2.01
VPS41YDR080W ERP2P39704 215 aa2.49□□□□□ -2.01
VPS41YDR080W SWD1P39706 426 aa2.49□□□□□ -2.01
VPS41YDR080W CFD1P40558 293 aa2.49□□□□□ -2.01
VPS41YDR080W YJL107CP42947 387 aa2.49□□□□□ -2.01
VPS41YDR080W ASG7P46993 209 aa2.49□□□□□ -2.01
VPS41YDR080W EMC4P53073 190 aa2.49□□□□□ -2.01
VPS41YDR080W STR3P53101 465 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W CIA1Q05583 330 aa2.49□□□□□ -2.01
VPS41YDR080W STT4P37297 1900 aa2.49□□□□□ -2.01
VPS41YDR080W PHO3P24031 467 aa2.49□□□□□ -2.01
VPS41YDR080W ATG15P25641 520 aa2.49□□□□□ -2.01
VPS41YDR080W BUD14P27637 709 aa2.49□□□□□ -2.01
VPS41YDR080W SWC5P38326 303 aa2.49□□□□□ -2.01
VPS41YDR080W SAP1P39955 897 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W YEL075CP39972 122 aa2.49□□□□□ -2.01
VPS41YDR080W SER3P40054 469 aa2.49□□□□□ -2.01
VPS41YDR080W HYR1P40581 163 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W AIP1P46680 615 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W IKS1P47042 667 aa2.49□□□□□ -2.01
VPS41YDR080W YPT11P48559 417 aa2.49□□□□□ -2.01
VPS41YDR080W NBP35P52920 328 aa2.49□□□□□ -2.01
VPS41YDR080W MOT3P54785 490 aaKnown RBP2.49□□□□□ -2.01
VPS41YDR080W MET14Q02196 202 aa2.49□□□□□ -2.01
VPS41YDR080W AIM6Q07716 390 aa2.49□□□□□ -2.01
VPS41YDR080W NUR1Q12066 484 aa2.49□□□□□ -2.01
VPS41YDR080W HUA2Q12134 243 aa2.49□□□□□ -2.01
VPS41YDR080W HOS1Q12214 470 aa2.49□□□□□ -2.01
VPS41YDR080W GLE1Q12315 538 aa2.49□□□□□ -2.01
VPS41YDR080W ACC1Q00955 2233 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms