RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SOK1YDR006C MDM20Q12387 796 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C TDH2P00358 332 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C PUP3P25451 205 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C FEN2P25621 512 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C COQ2P32378 372 aa2.8□□□□□ -1.96
SOK1YDR006C THI80P35202 319 aa2.8□□□□□ -1.96
SOK1YDR006C MAL33P38157 468 aa2.8□□□□□ -1.96
SOK1YDR006C YHR182WP38870 785 aa2.8□□□□□ -1.96
SOK1YDR006C MAF1P41910 395 aa2.8□□□□□ -1.96
SOK1YDR006C MPS3P47069 682 aa2.8□□□□□ -1.96
SOK1YDR006C PET117Q02771 107 aa2.8□□□□□ -1.96
SOK1YDR006C MMT1Q03218 510 aa2.8□□□□□ -1.96
SOK1YDR006C ARP10Q04549 284 aa2.8□□□□□ -1.96
SOK1YDR006C YFT2Q06676 274 aa2.8□□□□□ -1.96
SOK1YDR006C NOP12Q08208 459 aaKnown RBP2.8□□□□□ -1.96
SOK1YDR006C POM34Q12445 299 aa2.8□□□□□ -1.96
SOK1YDR006C TFB5Q3E7C1 72 aaPredicted RBP2.8□□□□□ -1.96
SOK1YDR006C CFT1Q06632 1357 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C YLR302CO13544 120 aa2.79□□□□□ -1.96
SOK1YDR006C ADH2P00331 348 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C ATP1P07251 545 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C GRR1P24814 1151 aa2.79□□□□□ -1.96
SOK1YDR006C PET18P25362 215 aa2.79□□□□□ -1.96
SOK1YDR006C ZUO1P32527 433 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C SUA5P32579 426 aa2.79□□□□□ -1.96
SOK1YDR006C PUB1P32588 453 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96 RIP-Chip
SOK1YDR006C EMP70P32802 667 aa2.79□□□□□ -1.96
SOK1YDR006C RPC34P32910 317 aa2.79□□□□□ -1.96
SOK1YDR006C DIA4P38705 446 aaPredicted RBP2.79□□□□□ -1.96
SOK1YDR006C YHR045WP38775 560 aa2.79□□□□□ -1.96
SOK1YDR006C YNG2P38806 282 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C WSS1P38838 269 aa2.79□□□□□ -1.96
SOK1YDR006C RTT107P38850 1070 aa2.79□□□□□ -1.96
SOK1YDR006C REV7P38927 245 aa2.79□□□□□ -1.96
SOK1YDR006C FKH2P41813 862 aa2.79□□□□□ -1.96
SOK1YDR006C HXT14P42833 540 aa2.79□□□□□ -1.96
SOK1YDR006C STE24P47154 453 aa2.79□□□□□ -1.96
SOK1YDR006C TAF6P53040 516 aa2.79□□□□□ -1.96
SOK1YDR006C YGR126WP53274 230 aa2.79□□□□□ -1.96
SOK1YDR006C COP1P53622 1201 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C CUS2P53830 285 aaPredicted RBP2.79□□□□□ -1.96
SOK1YDR006C BOP3P53958 396 aa2.79□□□□□ -1.96
SOK1YDR006C YAT1P80235 687 aa2.79□□□□□ -1.96
SOK1YDR006C YML037CQ03703 340 aa2.79□□□□□ -1.96
SOK1YDR006C PPM1Q04081 328 aa2.79□□□□□ -1.96
SOK1YDR006C CSI1Q04368 295 aa2.79□□□□□ -1.96
SOK1YDR006C RRG8Q06109 277 aa2.79□□□□□ -1.96
SOK1YDR006C YLR455WQ06188 304 aa2.79□□□□□ -1.96
SOK1YDR006C BCP1Q06338 283 aa2.79□□□□□ -1.96
SOK1YDR006C POS5Q06892 414 aa2.79□□□□□ -1.96
SOK1YDR006C BRX1Q08235 291 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C GLE1Q12315 538 aa2.79□□□□□ -1.96
SOK1YDR006C YDL007C-AQ2V2Q0 85 aa2.79□□□□□ -1.96
SOK1YDR006C YPR089WO13585 888 aa2.79□□□□□ -1.96
SOK1YDR006C PRP2P20095 876 aaPredicted RBP2.79□□□□□ -1.96
SOK1YDR006C CLN1P20437 546 aa2.79□□□□□ -1.96
SOK1YDR006C PEX1P24004 1043 aa2.79□□□□□ -1.96
SOK1YDR006C UBC8P28263 218 aa2.79□□□□□ -1.96
SOK1YDR006C COS9P36034 407 aa2.79□□□□□ -1.96
SOK1YDR006C YKR075CP36155 307 aa2.79□□□□□ -1.96
SOK1YDR006C KAP104P38217 918 aaKnown RBP2.79□□□□□ -1.96
SOK1YDR006C ELO1P39540 310 aa2.79□□□□□ -1.96
SOK1YDR006C ECM1P39715 212 aa2.79□□□□□ -1.96
SOK1YDR006C YTA12P40341 825 aa2.79□□□□□ -1.96
SOK1YDR006C YRB2P40517 327 aa2.79□□□□□ -1.96
SOK1YDR006C ULP2P40537 1034 aaPredicted RBP2.79□□□□□ -1.96
SOK1YDR006C SAD1P43589 448 aa2.79□□□□□ -1.96
SOK1YDR006C YFR018CP43599 363 aa2.79□□□□□ -1.96
SOK1YDR006C LOH1P47055 219 aa2.79□□□□□ -1.96
SOK1YDR006C COS5P47187 383 aa2.79□□□□□ -1.96
SOK1YDR006C MSY1P48527 492 aa2.79□□□□□ -1.96
SOK1YDR006C PMT5P52867 743 aa2.79□□□□□ -1.96
SOK1YDR006C REC102Q02721 264 aa2.79□□□□□ -1.96
SOK1YDR006C DCS1Q06151 350 aa2.79□□□□□ -1.96
SOK1YDR006C YFH1Q07540 174 aa2.79□□□□□ -1.96
SOK1YDR006C COS7Q07788 383 aa2.79□□□□□ -1.96
SOK1YDR006C RAX1Q08760 435 aa2.79□□□□□ -1.96
SOK1YDR006C FMP16Q12497 93 aa2.79□□□□□ -1.96
SOK1YDR006C RIP1P08067 215 aa2.78□□□□□ -1.96
SOK1YDR006C KGD2P19262 463 aaPredicted RBP2.78□□□□□ -1.96
SOK1YDR006C AMD2P22580 549 aa2.78□□□□□ -1.96
SOK1YDR006C PEP3P27801 918 aa2.78□□□□□ -1.96
SOK1YDR006C DCG1P32460 244 aa2.78□□□□□ -1.96
SOK1YDR006C CBF5P33322 483 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SOK1YDR006C TUL1P36096 758 aa2.78□□□□□ -1.96
SOK1YDR006C ERG7P38604 731 aa2.78□□□□□ -1.96
SOK1YDR006C CCT2P39076 527 aaKnown RBP2.78□□□□□ -1.96
SOK1YDR006C PHO90P39535 881 aa2.78□□□□□ -1.96
SOK1YDR006C YEL020CP39994 560 aa2.78□□□□□ -1.96
SOK1YDR006C VFA1P40080 203 aa2.78□□□□□ -1.96
SOK1YDR006C TAX4P47030 604 aa2.78□□□□□ -1.96
SOK1YDR006C MIG2P53035 382 aa2.78□□□□□ -1.96
SOK1YDR006C YGR066CP53242 292 aa2.78□□□□□ -1.96
SOK1YDR006C SPC98P53540 846 aa2.78□□□□□ -1.96
SOK1YDR006C YNL247WP53852 767 aaKnown RBP2.78□□□□□ -1.96
SOK1YDR006C IRC15Q02733 499 aa2.78□□□□□ -1.96
SOK1YDR006C RSM28Q03430 361 aa2.78□□□□□ -1.96
SOK1YDR006C CCE1Q03702 353 aa2.78□□□□□ -1.96
SOK1YDR006C FIN1Q03898 291 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms