RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeastyeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VCX1YDL128W YGK3Q12222 375 aaPredicted RBP5.41□□□□□ -1.54
VCX1YDL128W SNU23Q12368 194 aaPredicted RBP5.41□□□□□ -1.54
VCX1YDL128W ARG3P05150 338 aa5.4□□□□□ -1.54
VCX1YDL128W RAD7P06779 565 aa5.4□□□□□ -1.54
VCX1YDL128W YPK1P12688 680 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W SGV1P23293 657 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W DBR1P24309 405 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W DBP2P24783 546 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W NTG1P31378 399 aa5.4□□□□□ -1.54
VCX1YDL128W THI4P32318 326 aa5.4□□□□□ -1.54
VCX1YDL128W NOP4P37838 685 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W YMC2P38087 329 aa5.4□□□□□ -1.54
VCX1YDL128W STP2P38704 541 aa5.4□□□□□ -1.54
VCX1YDL128W VAC8P39968 578 aa5.4□□□□□ -1.54
VCX1YDL128W YEN1P40028 759 aa5.4□□□□□ -1.54
VCX1YDL128W YKE4P40544 346 aa5.4□□□□□ -1.54
VCX1YDL128W BUD13P46947 266 aaPredicted RBP5.4□□□□□ -1.54
VCX1YDL128W ZAP1P47043 880 aa5.4□□□□□ -1.54
VCX1YDL128W IRC18P47056 224 aa5.4□□□□□ -1.54
VCX1YDL128W YPT32P51996 222 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W COG1P53079 417 aa5.4□□□□□ -1.54
VCX1YDL128W ALG11P53954 548 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W TOF2Q02208 771 aa5.4□□□□□ -1.54
VCX1YDL128W HER2Q03557 464 aa5.4□□□□□ -1.54
VCX1YDL128W TAF12Q03761 539 aa5.4□□□□□ -1.54
VCX1YDL128W SEG1Q04279 960 aa5.4□□□□□ -1.54
VCX1YDL128W YLR413WQ06689 675 aa5.4□□□□□ -1.54
VCX1YDL128W GRS2Q06817 618 aa5.4□□□□□ -1.54
VCX1YDL128W YOL019WQ08157 551 aa5.4□□□□□ -1.54
VCX1YDL128W NBA1Q08229 501 aaKnown RBP5.4□□□□□ -1.54
VCX1YDL128W NRT1Q08485 598 aa5.4□□□□□ -1.54
VCX1YDL128W FEX2Q08991 375 aa5.4□□□□□ -1.54
VCX1YDL128W RBD2Q12270 262 aa5.4□□□□□ -1.54
VCX1YDL128W RPN6Q12377 434 aa5.4□□□□□ -1.54
VCX1YDL128W LAG2Q92325 660 aa5.4□□□□□ -1.54
VCX1YDL128W GAL10P04397 699 aa5.39□□□□□ -1.55
VCX1YDL128W ATP1P07251 545 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W MRP2P10663 115 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W RPB4P20433 221 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W ATP12P22135 325 aa5.39□□□□□ -1.55
VCX1YDL128W HXT2P23585 541 aa5.39□□□□□ -1.55
VCX1YDL128W YCR090CP25654 182 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W BUB2P26448 306 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W PMI40P29952 429 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W FUN30P31380 1131 aa5.39□□□□□ -1.55
VCX1YDL128W ARP2P32381 391 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W MRPL6P32904 214 aa5.39□□□□□ -1.55
VCX1YDL128W RPT1P33299 467 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W TOD6P34219 525 aa5.39□□□□□ -1.55
VCX1YDL128W TEF4P36008 412 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W PHO88P38264 188 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W SDH8P38345 138 aa5.39□□□□□ -1.55
VCX1YDL128W RIM4P38741 713 aa5.39□□□□□ -1.55
VCX1YDL128W AIM18P38884 321 aa5.39□□□□□ -1.55
VCX1YDL128W MLH1P38920 769 aa5.39□□□□□ -1.55
VCX1YDL128W LYS9P38999 446 aa5.39□□□□□ -1.55
VCX1YDL128W GIP4P39732 760 aa5.39□□□□□ -1.55
VCX1YDL128W YER034WP40022 185 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W RPT2P40327 437 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W MDV1P47025 714 aa5.39□□□□□ -1.55
VCX1YDL128W APS3P47064 194 aa5.39□□□□□ -1.55
VCX1YDL128W MTR3P48240 250 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W UPF3P48412 387 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W STB4P50104 949 aa5.39□□□□□ -1.55
VCX1YDL128W ALT2P52892 507 aa5.39□□□□□ -1.55
VCX1YDL128W CUL3P53202 744 aa5.39□□□□□ -1.55
VCX1YDL128W NQM1P53228 333 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W PRP38Q00723 242 aaPredicted RBP5.39□□□□□ -1.55
VCX1YDL128W NUP49Q02199 472 aa5.39□□□□□ -1.55
VCX1YDL128W NGL2Q03264 515 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W GCN5Q03330 439 aa5.39□□□□□ -1.55
VCX1YDL128W ENT5Q03769 411 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W YLR455WQ06188 304 aa5.39□□□□□ -1.55
VCX1YDL128W MLC2Q06580 163 aa5.39□□□□□ -1.55
VCX1YDL128W RSC3Q06639 885 aa5.39□□□□□ -1.55
VCX1YDL128W YDL121CQ07541 149 aa5.39□□□□□ -1.55
VCX1YDL128W GSH2Q08220 491 aa5.39□□□□□ -1.55
VCX1YDL128W YLL058WQ12198 575 aa5.39□□□□□ -1.55
VCX1YDL128W PST2Q12335 198 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W LPX1Q12405 387 aaKnown RBP5.39□□□□□ -1.55
VCX1YDL128W YPL119C-AQ3E751 87 aa5.39□□□□□ -1.55
VCX1YDL128W RIB3Q99258 208 aa5.39□□□□□ -1.55
VCX1YDL128W PMA1P05030 918 aaKnown RBP5.38□□□□□ -1.55
VCX1YDL128W ERG20P08524 352 aaKnown RBP5.38□□□□□ -1.55
VCX1YDL128W DSF1P0CX08 502 aa5.38□□□□□ -1.55
VCX1YDL128W YNR073CP0CX09 502 aa5.38□□□□□ -1.55
VCX1YDL128W HSP26P15992 214 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
VCX1YDL128W DBP3P20447 523 aaKnown RBP5.38□□□□□ -1.55
VCX1YDL128W CPR3P25719 182 aa5.38□□□□□ -1.55
VCX1YDL128W CIN8P27895 1000 aa5.38□□□□□ -1.55
VCX1YDL128W SYN8P31377 255 aa5.38□□□□□ -1.55
VCX1YDL128W HYM1P32464 399 aa5.38□□□□□ -1.55
VCX1YDL128W FRE2P36033 711 aa5.38□□□□□ -1.55
VCX1YDL128W ATP3P38077 311 aaKnown RBP5.38□□□□□ -1.55
VCX1YDL128W LEU5P38702 357 aa5.38□□□□□ -1.55
VCX1YDL128W YHR131CP38835 850 aa5.38□□□□□ -1.55
VCX1YDL128W DUN1P39009 513 aa5.38□□□□□ -1.55
VCX1YDL128W PLB1P39105 664 aa5.38□□□□□ -1.55
VCX1YDL128W EXO1P39875 702 aa5.38□□□□□ -1.55
VCX1YDL128W COA1P40452 197 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms