RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W CCP1P00431 361 aa6.79□□□□□ -1.32
NUP84YDL116W RPC40P07703 335 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W PRE9P23638 258 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W GRR1P24814 1151 aa6.79□□□□□ -1.32
NUP84YDL116W CLG1P35190 452 aa6.79□□□□□ -1.32
NUP84YDL116W CAF4P36130 643 aa6.79□□□□□ -1.32
NUP84YDL116W APM3P38153 483 aa6.79□□□□□ -1.32
NUP84YDL116W IPT1P38954 527 aa6.79□□□□□ -1.32
NUP84YDL116W SOP4P39543 234 aaPredicted RBP6.79□□□□□ -1.32
NUP84YDL116W AFG3P39925 761 aa6.79□□□□□ -1.32
NUP84YDL116W RSP5P39940 809 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W PAC1P39946 494 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W SEC28P40509 296 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W GTO1P48239 356 aa6.79□□□□□ -1.32
NUP84YDL116W NOG1Q02892 647 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W RCR2Q03446 210 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W YLR345WQ06137 509 aa6.79□□□□□ -1.32
NUP84YDL116W RPS9AO13516 197 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W CDC21P06785 304 aa6.79□□□□□ -1.32
NUP84YDL116W SAR1P20606 190 aaKnown RBP6.79□□□□□ -1.32
NUP84YDL116W DBF2P22204 572 aa6.79□□□□□ -1.32
NUP84YDL116W PHO91P27514 894 aa6.79□□□□□ -1.32
NUP84YDL116W GLG1P36143 616 aa6.79□□□□□ -1.32
NUP84YDL116W IPI1P38803 334 aaPredicted RBP6.79□□□□□ -1.32
NUP84YDL116W YIR016WP40572 265 aa6.79□□□□□ -1.32
NUP84YDL116W MRPS18P42847 217 aa6.79□□□□□ -1.32
NUP84YDL116W HOC1P47124 396 aa6.79□□□□□ -1.32
NUP84YDL116W GCN5Q03330 439 aa6.79□□□□□ -1.32
NUP84YDL116W SSQ1Q05931 657 aaPredicted RBP6.79□□□□□ -1.32
NUP84YDL116W ATG34Q12292 412 aa6.79□□□□□ -1.32
NUP84YDL116W SCM3Q12334 223 aa6.79□□□□□ -1.32
NUP84YDL116W YPL119C-AQ3E751 87 aa6.79□□□□□ -1.32
NUP84YDL116W LEU4P06208 619 aaKnown RBP6.78□□□□□ -1.32
NUP84YDL116W SIR3P06701 978 aa6.78□□□□□ -1.32
NUP84YDL116W SEC17P32602 292 aa6.78□□□□□ -1.32
NUP84YDL116W IMP3P32899 183 aaPredicted RBP6.78□□□□□ -1.32
NUP84YDL116W TKL2P33315 681 aa6.78□□□□□ -1.32
NUP84YDL116W MBP1P39678 833 aa6.78□□□□□ -1.32
NUP84YDL116W RGI2P40188 164 aa6.78□□□□□ -1.32
NUP84YDL116W ALG8P40351 577 aa6.78□□□□□ -1.32
NUP84YDL116W GNP1P48813 663 aa6.78□□□□□ -1.32
NUP84YDL116W PRM8P53174 237 aa6.78□□□□□ -1.32
NUP84YDL116W NHP10Q03435 203 aa6.78□□□□□ -1.32
NUP84YDL116W DAL4Q04895 635 aa6.78□□□□□ -1.32
NUP84YDL116W YOL131WQ08270 108 aa6.78□□□□□ -1.32
NUP84YDL116W YDR061WQ12298 539 aa6.78□□□□□ -1.32
NUP84YDL116W RPL6BP05739 176 aaKnown RBP6.78□□□□□ -1.32
NUP84YDL116W UNG1P12887 359 aa6.78□□□□□ -1.32
NUP84YDL116W DAP2P18962 818 aa6.78□□□□□ -1.32
NUP84YDL116W RER1P25560 188 aa6.78□□□□□ -1.32
NUP84YDL116W IDH2P28241 369 aaKnown RBP6.78□□□□□ -1.32
NUP84YDL116W GND1P38720 489 aaKnown RBP6.78□□□□□ -1.32
NUP84YDL116W IES5P40060 125 aa6.78□□□□□ -1.32
NUP84YDL116W YKE4P40544 346 aa6.78□□□□□ -1.32
NUP84YDL116W ALR2P43553 858 aa6.78□□□□□ -1.32
NUP84YDL116W PMT4P46971 762 aa6.78□□□□□ -1.32
NUP84YDL116W YNL034WP53963 612 aa6.78□□□□□ -1.32
NUP84YDL116W RCF1Q03713 159 aa6.78□□□□□ -1.32
NUP84YDL116W YDR124WQ04608 324 aa6.78□□□□□ -1.32
NUP84YDL116W SSL1Q04673 461 aaPredicted RBP6.78□□□□□ -1.32
NUP84YDL116W RAD34Q06665 692 aa6.78□□□□□ -1.32
NUP84YDL116W TIF6Q12522 245 aaKnown RBP6.78□□□□□ -1.32
NUP84YDL116W ATP4P05626 244 aa6.77□□□□□ -1.33
NUP84YDL116W KIN2P13186 1147 aaKnown RBP6.77□□□□□ -1.33
NUP84YDL116W YKL100CP34248 587 aa6.77□□□□□ -1.33
NUP84YDL116W TVP23P38962 199 aa6.77□□□□□ -1.33
NUP84YDL116W PAN6P40459 309 aa6.77□□□□□ -1.33
NUP84YDL116W SER2P42941 309 aa6.77□□□□□ -1.33
NUP84YDL116W NET1P47035 1189 aa6.77□□□□□ -1.33
NUP84YDL116W HMS2P47175 358 aa6.77□□□□□ -1.33
NUP84YDL116W AMA1P50082 593 aa6.77□□□□□ -1.33
NUP84YDL116W MRH4P53166 561 aa6.77□□□□□ -1.33
NUP84YDL116W YNR068CP53754 272 aa6.77□□□□□ -1.33
NUP84YDL116W NOP13P53883 403 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
NUP84YDL116W YNL134CP53912 376 aaKnown RBP6.77□□□□□ -1.33
NUP84YDL116W MCD1Q12158 566 aa6.77□□□□□ -1.33
NUP84YDL116W KGD1P20967 1014 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W GIT1P25346 518 aa6.76□□□□□ -1.33
NUP84YDL116W MET22P32179 357 aa6.76□□□□□ -1.33
NUP84YDL116W APE2P32454 952 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W HCS1P34243 683 aa6.76□□□□□ -1.33
NUP84YDL116W APT2P36973 181 aa6.76□□□□□ -1.33
NUP84YDL116W SHE3P38272 425 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W EXO1P39875 702 aa6.76□□□□□ -1.33
NUP84YDL116W PAM16P42949 149 aa6.76□□□□□ -1.33
NUP84YDL116W HAM1P47119 197 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W VPS73P53142 486 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W SCW11P53189 542 aa6.76□□□□□ -1.33
NUP84YDL116W SVL3Q03088 825 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W YDR132CQ03900 495 aa6.76□□□□□ -1.33
NUP84YDL116W DLT1Q04216 342 aa6.76□□□□□ -1.33
NUP84YDL116W GAL83Q04739 417 aa6.76□□□□□ -1.33
NUP84YDL116W PKH2Q12236 1081 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W GTT2Q12390 233 aa6.76□□□□□ -1.33
NUP84YDL116W TRM10Q12400 293 aa6.76□□□□□ -1.33
NUP84YDL116W FMP16Q12497 93 aa6.76□□□□□ -1.33
NUP84YDL116W PTC6P25646 442 aa6.76□□□□□ -1.33
NUP84YDL116W CAT2P32796 670 aaKnown RBP6.76□□□□□ -1.33
NUP84YDL116W ASH1P34233 588 aa6.76□□□□□ -1.33
NUP84YDL116W ZRT3P34240 503 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms