RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	BSC1	Q12140	328 aa		4.87	□□□□□ -1.63
SED4	YCR067C	LCB4	Q12246	624 aa		4.87	□□□□□ -1.63
SED4	YCR067C	CSR2	Q12734	1121 aa		4.87	□□□□□ -1.63
SED4	YCR067C	EFG1	Q3E705	233 aa	Known RBP	4.87	□□□□□ -1.63
SED4	YCR067C	MDM12	Q92328	271 aa		4.87	□□□□□ -1.63
SED4	YCR067C	FPS1	P23900	669 aa		4.86	□□□□□ -1.63
SED4	YCR067C	COQ2	P32378	372 aa		4.86	□□□□□ -1.63
SED4	YCR067C	SEA4	P38164	1038 aa		4.86	□□□□□ -1.63
SED4	YCR067C	YER186C	P40101	306 aa		4.86	□□□□□ -1.63
SED4	YCR067C	KEL2	P50090	882 aa		4.86	□□□□□ -1.63
SED4	YCR067C	BOL2	P53082	120 aa		4.86	□□□□□ -1.63
SED4	YCR067C	RRT6	P53117	311 aa	Predicted RBP	4.86	□□□□□ -1.63
SED4	YCR067C	MPC1	P53157	130 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	HHO1	P53551	258 aa		4.86	□□□□□ -1.63
SED4	YCR067C	NUP49	Q02199	472 aa		4.86	□□□□□ -1.63
SED4	YCR067C	RLI1	Q03195	608 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	ENT5	Q03769	411 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	YLR455W	Q06188	304 aa		4.86	□□□□□ -1.63
SED4	YCR067C	MRPL35	Q06678	367 aa		4.86	□□□□□ -1.63
SED4	YCR067C	YLR049C	Q12110	428 aa		4.86	□□□□□ -1.63
SED4	YCR067C	MRH1	Q12117	320 aa	Predicted RBP	4.86	□□□□□ -1.63
SED4	YCR067C	MCD1	Q12158	566 aa		4.86	□□□□□ -1.63
SED4	YCR067C	YLR149C	Q99296	730 aa		4.86	□□□□□ -1.63
SED4	YCR067C	TDH1	P00360	332 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	PET54	P10834	293 aa		4.86	□□□□□ -1.63
SED4	YCR067C	TFS1	P14306	219 aa		4.86	□□□□□ -1.63
SED4	YCR067C	PHO80	P20052	293 aa		4.86	□□□□□ -1.63
SED4	YCR067C	PEX34	P25584	144 aa		4.86	□□□□□ -1.63
SED4	YCR067C	UTR4	P32626	227 aa		4.86	□□□□□ -1.63
SED4	YCR067C	LEU5	P38702	357 aa		4.86	□□□□□ -1.63
SED4	YCR067C	GCV1	P48015	400 aa		4.86	□□□□□ -1.63
SED4	YCR067C	YGR127W	P53275	312 aa		4.86	□□□□□ -1.63
SED4	YCR067C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SED4	YCR067C	PEX29	Q03370	554 aa		4.86	□□□□□ -1.63
SED4	YCR067C	DBP9	Q06218	594 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	VTA1	Q06263	330 aa		4.86	□□□□□ -1.63
SED4	YCR067C	DXO1	Q06349	442 aa		4.86	□□□□□ -1.63
SED4	YCR067C	NBP2	Q12163	236 aa		4.86	□□□□□ -1.63
SED4	YCR067C	LAG2	Q92325	660 aa		4.86	□□□□□ -1.63
SED4	YCR067C	HEM2	P05373	342 aa		4.86	□□□□□ -1.63
SED4	YCR067C	ERG20	P08524	352 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	ANR2	P36090	516 aa	Predicted RBP	4.86	□□□□□ -1.63
SED4	YCR067C	GPT2	P36148	743 aa		4.86	□□□□□ -1.63
SED4	YCR067C	SRP68	P38687	599 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	KTR7	P40504	517 aa		4.86	□□□□□ -1.63
SED4	YCR067C	LSM1	P47017	172 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	YAE1	P47118	141 aa	Predicted RBP	4.86	□□□□□ -1.63
SED4	YCR067C	SHY1	P53266	389 aa		4.86	□□□□□ -1.63
SED4	YCR067C	SOK2	P53438	785 aa	Predicted RBP	4.86	□□□□□ -1.63
SED4	YCR067C	ZRG17	P53735	605 aa		4.86	□□□□□ -1.63
SED4	YCR067C	RCO1	Q04779	684 aa		4.86	□□□□□ -1.63
SED4	YCR067C	MSC6	Q08818	692 aa	Known RBP	4.86	□□□□□ -1.63
SED4	YCR067C	YOR012W	Q12351	137 aa		4.86	□□□□□ -1.63
SED4	YCR067C	CTF3	Q12748	733 aa		4.86	□□□□□ -1.63
SED4	YCR067C	RPS9A	O13516	197 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	MET8	P15807	274 aa		4.85	□□□□□ -1.63
SED4	YCR067C	RDS2	P19541	446 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	RPL24B	P24000	155 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	ARO7	P32178	256 aa		4.85	□□□□□ -1.63
SED4	YCR067C	SKT5	P34226	696 aa		4.85	□□□□□ -1.63
SED4	YCR067C	YRO2	P38079	344 aa		4.85	□□□□□ -1.63
SED4	YCR067C	AGP2	P38090	596 aa		4.85	□□□□□ -1.63
SED4	YCR067C	COG3	P40094	801 aa		4.85	□□□□□ -1.63
SED4	YCR067C	GDS1	P41913	522 aa		4.85	□□□□□ -1.63
SED4	YCR067C	YFR018C	P43599	363 aa		4.85	□□□□□ -1.63
SED4	YCR067C	PRM8	P53174	237 aa		4.85	□□□□□ -1.63
SED4	YCR067C	POP6	P53218	158 aa		4.85	□□□□□ -1.63
SED4	YCR067C	SLI1	P53304	468 aa		4.85	□□□□□ -1.63
SED4	YCR067C	SIW14	P53965	281 aa		4.85	□□□□□ -1.63
SED4	YCR067C	GOT1	Q03554	138 aa		4.85	□□□□□ -1.63
SED4	YCR067C	YDR514C	Q04408	483 aa		4.85	□□□□□ -1.63
SED4	YCR067C	RRP9	Q06506	573 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	MLC2	Q06580	163 aa		4.85	□□□□□ -1.63
SED4	YCR067C	YPL191C	Q08930	360 aa		4.85	□□□□□ -1.63
SED4	YCR067C	UBX3	Q12229	455 aa		4.85	□□□□□ -1.63
SED4	YCR067C	CDC4	P07834	779 aa		4.85	□□□□□ -1.63
SED4	YCR067C	ART10	P18634	518 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	CYS3	P31373	394 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	NTG1	P31378	399 aa		4.85	□□□□□ -1.63
SED4	YCR067C	COX13	P32799	129 aa		4.85	□□□□□ -1.63
SED4	YCR067C	SEC61	P32915	480 aa		4.85	□□□□□ -1.63
SED4	YCR067C	MRPL7	P36519	292 aa		4.85	□□□□□ -1.63
SED4	YCR067C	DUN1	P39009	513 aa		4.85	□□□□□ -1.63
SED4	YCR067C	UTP18	P40362	594 aa	Predicted RBP	4.85	□□□□□ -1.63
SED4	YCR067C	NIT1	P40447	199 aa		4.85	□□□□□ -1.63
SED4	YCR067C	YAT1	P80235	687 aa		4.85	□□□□□ -1.63
SED4	YCR067C	ARX1	Q03862	593 aa	Known RBP	4.85	□□□□□ -1.63
SED4	YCR067C	PGC1	Q08959	321 aa		4.85	□□□□□ -1.63
SED4	YCR067C	RAD59	Q12223	238 aa		4.85	□□□□□ -1.63
SED4	YCR067C	ICT1	Q12385	394 aa		4.85	□□□□□ -1.63
SED4	YCR067C	ZPS1	Q12512	249 aa		4.85	□□□□□ -1.63
SED4	YCR067C	COX5A	P00424	153 aa		4.84	□□□□□ -1.63
SED4	YCR067C	ARG81	P05085	880 aa		4.84	□□□□□ -1.63
SED4	YCR067C	NHP6B	P11633	99 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	SAR1	P20606	190 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	HYM1	P32464	399 aa		4.84	□□□□□ -1.63
SED4	YCR067C	PEP7	P32609	515 aa		4.84	□□□□□ -1.63
SED4	YCR067C	STE5	P32917	917 aa		4.84	□□□□□ -1.63
SED4	YCR067C	YEL028W	P39989	153 aa		4.84	□□□□□ -1.63
SED4	YCR067C	RPS10B	P46784	105 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms