RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W TRS31Q03337 283 aa2.21□□□□□ -2.06
NUP170YBL079W ECI1Q05871 280 aa2.21□□□□□ -2.06
NUP170YBL079W YPR091CQ06833 770 aa2.21□□□□□ -2.06
NUP170YBL079W CUE5Q08412 411 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W RAX1Q08760 435 aa2.21□□□□□ -2.06
NUP170YBL079W SAM3Q08986 587 aa2.21□□□□□ -2.06
NUP170YBL079W NUS1Q12063 375 aa2.21□□□□□ -2.06
NUP170YBL079W MMP1Q12372 583 aa2.21□□□□□ -2.06
NUP170YBL079W HRP1Q99383 534 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W ATP2P00830 511 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W LEU1P07264 779 aaKnown RBP2.21□□□□□ -2.06
NUP170YBL079W IME1P21190 360 aa2.21□□□□□ -2.06
NUP170YBL079W DPB3P27344 201 aa2.21□□□□□ -2.06
NUP170YBL079W YME1P32795 747 aa2.21□□□□□ -2.06
NUP170YBL079W CBF5P33322 483 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
NUP170YBL079W YJL193WP39542 402 aa2.21□□□□□ -2.06
NUP170YBL079W ICE2P40499 491 aa2.21□□□□□ -2.06
NUP170YBL079W MMM1P41800 426 aa2.21□□□□□ -2.06
NUP170YBL079W FDC1Q03034 503 aa2.21□□□□□ -2.06
NUP170YBL079W PFA5Q03289 374 aa2.21□□□□□ -2.06
NUP170YBL079W DCR2Q05924 578 aa2.21□□□□□ -2.06
NUP170YBL079W YML002WP0CF17 737 aa2.2□□□□□ -2.06
NUP170YBL079W GCY1P14065 312 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
NUP170YBL079W LHS1P36016 881 aa2.2□□□□□ -2.06
NUP170YBL079W SPC34P36131 295 aa2.2□□□□□ -2.06
NUP170YBL079W APE4P38821 490 aa2.2□□□□□ -2.06
NUP170YBL079W IBA57P47158 497 aa2.2□□□□□ -2.06
NUP170YBL079W PUS4P48567 403 aaKnown RBP2.2□□□□□ -2.06
NUP170YBL079W KEL2P50090 882 aa2.2□□□□□ -2.06
NUP170YBL079W ROT1Q03691 256 aa2.2□□□□□ -2.06
NUP170YBL079W ROY1Q04847 553 aa2.2□□□□□ -2.06
NUP170YBL079W RSC3Q06639 885 aa2.2□□□□□ -2.06
NUP170YBL079W FDH1Q08911 376 aa2.2□□□□□ -2.06
NUP170YBL079W AIM41Q12032 185 aa2.2□□□□□ -2.06
NUP170YBL079W ACF2Q12168 779 aa2.2□□□□□ -2.06
NUP170YBL079W YHR214C-DP0CX93 97 aa2.2□□□□□ -2.06
NUP170YBL079W YMC1P32331 307 aa2.2□□□□□ -2.06
NUP170YBL079W RPC82P32349 654 aa2.2□□□□□ -2.06
NUP170YBL079W MDJ1P35191 511 aa2.2□□□□□ -2.06
NUP170YBL079W GLG1P36143 616 aa2.2□□□□□ -2.06
NUP170YBL079W SIF2P38262 535 aa2.2□□□□□ -2.06
NUP170YBL079W MNL1P38888 796 aa2.2□□□□□ -2.06
NUP170YBL079W CIN1P40987 1014 aa2.2□□□□□ -2.06
NUP170YBL079W ALB1P47019 175 aaPredicted RBP2.2□□□□□ -2.06
NUP170YBL079W MAD3P47074 515 aa2.2□□□□□ -2.06
NUP170YBL079W ZIP2P53061 704 aa2.2□□□□□ -2.06
NUP170YBL079W COX18P53239 316 aa2.2□□□□□ -2.06
NUP170YBL079W MRS2Q01926 470 aa2.2□□□□□ -2.06
NUP170YBL079W EFR3Q03653 782 aaKnown RBP2.2□□□□□ -2.06
NUP170YBL079W GLO2Q05584 274 aa2.2□□□□□ -2.06
NUP170YBL079W SEC10Q06245 871 aa2.2□□□□□ -2.06
NUP170YBL079W SYT1Q06836 1226 aa2.2□□□□□ -2.06
NUP170YBL079W YOR059CQ08448 450 aaKnown RBP2.2□□□□□ -2.06
NUP170YBL079W MRH1Q12117 320 aaPredicted RBP2.2□□□□□ -2.06
NUP170YBL079W SSA3P09435 649 aaKnown RBP2.2□□□□□ -2.06
NUP170YBL079W ADH4P10127 382 aa2.2□□□□□ -2.06
NUP170YBL079W ERD1P16151 362 aa2.2□□□□□ -2.06
NUP170YBL079W VPS34P22543 875 aa2.2□□□□□ -2.06
NUP170YBL079W CTS1P29029 562 aa2.2□□□□□ -2.06
NUP170YBL079W MRE11P32829 692 aa2.2□□□□□ -2.06
NUP170YBL079W NUF2P33895 451 aa2.2□□□□□ -2.06
NUP170YBL079W TPO5P36029 618 aa2.2□□□□□ -2.06
NUP170YBL079W TRR2P38816 342 aa2.2□□□□□ -2.06
NUP170YBL079W TAH11P47112 604 aa2.2□□□□□ -2.06
NUP170YBL079W ROG1P53118 685 aa2.2□□□□□ -2.06
NUP170YBL079W SLM2P53955 656 aa2.2□□□□□ -2.06
NUP170YBL079W SPC19Q03954 165 aa2.2□□□□□ -2.06
NUP170YBL079W BSC2Q05611 235 aa2.2□□□□□ -2.06
NUP170YBL079W GMC2Q06201 188 aa2.2□□□□□ -2.06
NUP170YBL079W ERP4Q12450 207 aa2.2□□□□□ -2.06
NUP170YBL079W CDC8P00572 216 aa2.19□□□□□ -2.06
NUP170YBL079W RPS17AP02407 136 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W ARG3P05150 338 aa2.19□□□□□ -2.06
NUP170YBL079W RPS17BP14127 136 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W SPO7P18410 259 aa2.19□□□□□ -2.06
NUP170YBL079W YCL068CP25593 260 aa2.19□□□□□ -2.06
NUP170YBL079W RSC6P25632 483 aa2.19□□□□□ -2.06
NUP170YBL079W RSM22P36056 628 aa2.19□□□□□ -2.06
NUP170YBL079W IRS4P36115 615 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W MGE1P38523 228 aa2.19□□□□□ -2.06
NUP170YBL079W SHR5P41912 237 aa2.19□□□□□ -2.06
NUP170YBL079W ASG7P46993 209 aa2.19□□□□□ -2.06
NUP170YBL079W GTB1Q04924 702 aa2.19□□□□□ -2.06
NUP170YBL079W HAL9Q12180 1030 aa2.19□□□□□ -2.06
NUP170YBL079W COR1P07256 457 aa2.19□□□□□ -2.06
NUP170YBL079W HOP09932 586 aa2.19□□□□□ -2.06
NUP170YBL079W TRX2P22803 104 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W CTR86P25355 563 aa2.19□□□□□ -2.06
NUP170YBL079W NAM9P27929 486 aa2.19□□□□□ -2.06
NUP170YBL079W URA7P28274 579 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W MSP1P28737 362 aa2.19□□□□□ -2.06
NUP170YBL079W CDC5P32562 705 aa2.19□□□□□ -2.06
NUP170YBL079W BEM3P32873 1128 aa2.19□□□□□ -2.06
NUP170YBL079W MRPS18P42847 217 aa2.19□□□□□ -2.06
NUP170YBL079W YJR141WP47172 347 aaPredicted RBP2.19□□□□□ -2.06
NUP170YBL079W DBP6P53734 629 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W ELP4Q02884 456 aaKnown RBP2.19□□□□□ -2.06
NUP170YBL079W PLM2Q04383 521 aa2.19□□□□□ -2.06
NUP170YBL079W SGT1Q08446 395 aa2.19□□□□□ -2.06
NUP170YBL079W CBP6P07253 162 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms