RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
PTPRVP-204ENST00000639439 BAZ2BQ9UIF8 2168 aaKnown RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 CCDC69A6NI79 296 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 MMP3P08254 477 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 CALM1P0DP23 149 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 CALM2P0DP24 149 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 CALM3P0DP25 149 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 CASTP20810 708 aaKnown RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 HOXA13P31271 388 aaPredicted RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 RASIP1Q5U651 963 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 VSIG10LQ86VR7 867 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 RPUSD2Q8IZ73 545 aaKnown RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 SLC17A8Q8NDX2 589 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 RRP36Q96EU6 259 aaKnown RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 FAM161BQ96MY7 647 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 GUCD1Q96NT3 240 aa17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
PTPRVP-204ENST00000639439 FGBP02675 491 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 ACRP10323 421 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 MYCLP12524 364 aaPredicted RBP17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 CCND2P30279 289 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 CCL23P55773 120 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 PGM5Q15124 567 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 DGKDQ16760 1214 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 HERVK_113Q902F9 699 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 SEC63Q9UGP8 760 aaKnown RBP17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 COL6A3P12111 3177 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
PTPRVP-204ENST00000639439 PFKMP08237 780 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 TGFB3P10600 412 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 FCHSD1Q86WN1 690 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 DHX37Q8IY37 1157 aaKnown RBP17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 PPTC7Q8NI37 304 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 MYL10Q9BUA6 226 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 WNT8AQ9H1J5 351 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
PTPRVP-204ENST00000639439 KIAA1217Q5T5P2 1943 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 CDC45O75419 566 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 STAM2O75886 525 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 CYP2C9P11712 490 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 DNAJB2P25686 324 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 PIBF1Q8WXW3 757 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 CUL5Q93034 780 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 CDX2Q99626 313 aaPredicted RBP17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 TTYH1Q9H313 450 aaPredicted RBP17.96■□□□□ 0.47
PTPRVP-204ENST00000639439 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 RGS20O76081 388 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 RFC2P35250 354 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 BFSP2Q13515 415 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 GNPTABQ3T906 1256 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 SYNE3Q6ZMZ3 975 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 SGMS1Q86VZ5 419 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 RETREG2Q8NC44 543 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 FRMPD4Q14CM0 1322 aa17.95■□□□□ 0.46
PTPRVP-204ENST00000639439 PPFIA4O75335 1185 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 CELF3Q5SZQ8 465 aaKnown RBP17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 MYSM1Q5VVJ2 828 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 SKAP1Q86WV1 359 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 SRBD1Q8N5C6 995 aaKnown RBP17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 CCDC155Q8N6L0 562 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 IL31RAQ8NI17 732 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 SMARCC2Q8TAQ2 1214 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 KAT2BQ92831 832 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 TIFAQ96CG3 184 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 SCLYQ96I15 445 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
PTPRVP-204ENST00000639439 PIK3CDO00329 1044 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 PLEKHA8P1O95397 391 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 GGPS1O95749 300 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 F2P00734 622 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 KRT32Q14532 448 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 RAB30Q15771 203 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 PTGISQ16647 500 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 TSGA10IPQ3SY00 556 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 XRRA1Q6P2D8 792 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 FANCBQ8NB91 859 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 CAGE1Q8TC20 777 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 SPATA33Q96N06 139 aa17.93■□□□□ 0.46
PTPRVP-204ENST00000639439 RXRAP19793 462 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 ICAM3P32942 547 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 PSEN2P49810 448 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 TMTC3Q6ZXV5 915 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 INPP4AQ96PE3 977 aaPredicted RBP17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 LRRC2Q9BYS8 371 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 PBX4Q9BYU1 374 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 ZNF576Q9H609 170 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 MLXIPQ9HAP2 919 aa17.92■□□□□ 0.46
PTPRVP-204ENST00000639439 CXXC1Q9P0U4 656 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms