RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 KCNV1Q6PIU1 500 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 C16orf59Q7L2K0 433 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSBP4-215ENST00000625926 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
SSBP4-215ENST00000625926 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
SSBP4-215ENST00000625926 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 MMP3P08254 477 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 ACRP10323 421 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 TGFB3P10600 412 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 CCND2P30279 289 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 KRT32Q14532 448 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 PSRC1Q6PGN9 363 aaPredicted RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 SRBD1Q8N5C6 995 aaKnown RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 FANCBQ8NB91 859 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 CUL5Q93034 780 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 EMID1Q96A84 441 aaPredicted RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 IL23AQ9NPF7 189 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 TRMT13Q9NUP7 481 aaKnown RBP12.52□□□□□ -0.41
SSBP4-215ENST00000625926 PLXNA1Q9UIW2 1896 aa12.52□□□□□ -0.41
SSBP4-215ENST00000625926 ZNFX1Q9P2E3 1918 aaKnown RBP12.51□□□□□ -0.41
SSBP4-215ENST00000625926 RGS20O76081 388 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 FGBP02675 491 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 CYP2C9P11712 490 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 RXRAP19793 462 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 CCL23P55773 120 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 CHMP4BP1P59074 171 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
SSBP4-215ENST00000625926 DGKDQ16760 1214 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 ZNF365Q70YC5 407 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
SSBP4-215ENST00000625926 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
SSBP4-215ENST00000625926 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
SSBP4-215ENST00000625926 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 FAM161BQ96MY7 647 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 UMODL1Q5DID0 1318 aa12.51□□□□□ -0.41
SSBP4-215ENST00000625926 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 PPFIA4O75335 1185 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 STAM2O75886 525 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 CELF3Q5SZQ8 465 aaKnown RBP12.5□□□□□ -0.41
SSBP4-215ENST00000625926 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 IL31RAQ8NI17 732 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
SSBP4-215ENST00000625926 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
SSBP4-215ENST00000625926 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 PRDM6Q9NQX0 595 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 LAMA4Q16363 1823 aa12.5□□□□□ -0.41
SSBP4-215ENST00000625926 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 MEIS2O14770 477 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 GGPS1O95749 300 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 NEFLP07196 543 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 HMGB1P09429 215 aaKnown RBP12.49□□□□□ -0.41
SSBP4-215ENST00000625926 SP2Q02086 613 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 ADCK5Q3MIX3 580 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 GNPTABQ3T906 1256 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 SESTD1Q86VW0 696 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 MICU3Q86XE3 530 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 RETREG2Q8NC44 543 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 KAT2BQ92831 832 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 SPATA33Q96N06 139 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 PSTPIP2Q9H939 334 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
SSBP4-215ENST00000625926 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
SSBP4-215ENST00000625926 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 SORBS3O60504 671 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 UBA1P22314 1058 aaKnown RBP12.48□□□□□ -0.41
SSBP4-215ENST00000625926 ICAM3P32942 547 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 PSEN2P49810 448 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
SSBP4-215ENST00000625926 BFSP2Q13515 415 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 PTGISQ16647 500 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms