RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 TRANK1O15050 2925 aa25.69■■□□□ 1.7
SRRT-218ENST00000620394 CYP21A2P08686 494 aa25.69■■□□□ 1.7
SRRT-218ENST00000620394 PTH1RQ03431 593 aa25.69■■□□□ 1.7
SRRT-218ENST00000620394 PPP2R5BQ15173 497 aa25.69■■□□□ 1.7
SRRT-218ENST00000620394 CERS4Q9HA82 394 aa25.69■■□□□ 1.7
SRRT-218ENST00000620394 EPOPA6NHQ4 379 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 B4DLN1 442 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 KIF28PB7ZC32 967 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 RFXAPO00287 272 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 SGSM2O43147 1006 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 MRPL12P52815 198 aaKnown RBP25.68■■□□□ 1.7
SRRT-218ENST00000620394 TAP1Q03518 808 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 PTPN11Q06124 597 aaPredicted RBP25.68■■□□□ 1.7
SRRT-218ENST00000620394 HERC6Q8IVU3 1022 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 MTMR8Q96EF0 704 aa25.68■■□□□ 1.7
SRRT-218ENST00000620394 ARIH1Q9Y4X5 557 aaPredicted RBP25.68■■□□□ 1.7
SRRT-218ENST00000620394 U3KPZ7 1027 aaPredicted RBP25.68■■□□□ 1.7
SRRT-218ENST00000620394 KPNA6O60684 536 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 BAIAP3O94812 1187 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 IQCF3P0C7M6 154 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 GHRHRQ02643 423 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 BFSP2Q13515 415 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 NBPF20Q3BBV1 942 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 STAG2Q8N3U4 1231 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 RETREG2Q8NC44 543 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 SYTL5Q8TDW5 730 aaPredicted RBP25.67■■□□□ 1.7
SRRT-218ENST00000620394 ARNTL2Q8WYA1 636 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 COL20A1Q9P218 1284 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 HCN4Q9Y3Q4 1203 aa25.67■■□□□ 1.7
SRRT-218ENST00000620394 TRDNQ13061 729 aa25.66■■□□□ 1.7
SRRT-218ENST00000620394 FBXO11Q86XK2 927 aa25.66■■□□□ 1.7
SRRT-218ENST00000620394 MCF2L2Q86YR7 1114 aa25.66■■□□□ 1.7
SRRT-218ENST00000620394 TBC1D5Q92609 795 aa25.66■■□□□ 1.7
SRRT-218ENST00000620394 MAD2L2Q9UI95 211 aa25.66■■□□□ 1.7
SRRT-218ENST00000620394 MRPL11Q9Y3B7 192 aaKnown RBP25.66■■□□□ 1.7
SRRT-218ENST00000620394 TET1Q8NFU7 2136 aa25.65■■□□□ 1.7
SRRT-218ENST00000620394 HLA-CQ95604 372 aa25.65■■□□□ 1.7
SRRT-218ENST00000620394 FTOQ9C0B1 505 aaKnown RBP eCLIP25.65■■□□□ 1.7
SRRT-218ENST00000620394 NOD1Q9Y239 953 aa25.65■■□□□ 1.7
SRRT-218ENST00000620394 PALM3A6NDB9 673 aaPredicted RBP25.64■■□□□ 1.7
SRRT-218ENST00000620394 A6NJR5 290 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 OPLAHO14841 1288 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 DHX16O60231 1041 aaKnown RBP25.64■■□□□ 1.7
SRRT-218ENST00000620394 ARIH2O95376 493 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 KRT40Q6A162 431 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 CCDC62Q6P9F0 684 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 CCDC155Q8N6L0 562 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 NSUN6Q8TEA1 469 aaKnown RBP25.64■■□□□ 1.7
SRRT-218ENST00000620394 TAAR1Q96RJ0 339 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 TAF6LQ9Y6J9 622 aa25.64■■□□□ 1.7
SRRT-218ENST00000620394 KLRF2D3W0D1 207 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 ARHGEF15O94989 841 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 HOXD11P31277 338 aaPredicted RBP25.63■■□□□ 1.69
SRRT-218ENST00000620394 KCNJ6P48051 423 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 GRM4Q14833 912 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 STOX1Q6ZVD7 989 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 IWS1Q96ST2 819 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 AMNQ9BXJ7 453 aa25.63■■□□□ 1.69
SRRT-218ENST00000620394 TRIP12Q14669 1992 aaPredicted RBP25.63■■□□□ 1.69
SRRT-218ENST00000620394 BAZ2BQ9UIF8 2168 aaKnown RBP25.62■■□□□ 1.69
SRRT-218ENST00000620394 E7EWF7 191 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 ZBTB5O15062 677 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 TLL1O43897 1013 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 PPP1R11O60927 126 aaPredicted RBP25.62■■□□□ 1.69
SRRT-218ENST00000620394 TXNP10599 105 aaKnown RBP25.62■■□□□ 1.69
SRRT-218ENST00000620394 HSD17B4P51659 736 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 GRB10Q13322 594 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 SLC35G1Q2M3R5 365 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 CAGE1Q8TC20 777 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 COPS5Q92905 334 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 MAP4K1Q92918 833 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 RMDN3Q96TC7 470 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 LRFN3Q9BTN0 628 aa25.62■■□□□ 1.69
SRRT-218ENST00000620394 TMEM31Q5JXX7 168 aa25.61■■□□□ 1.69
SRRT-218ENST00000620394 RALYLQ86SE5 291 aaKnown RBP25.61■■□□□ 1.69
SRRT-218ENST00000620394 NCOA7Q8NI08 942 aa25.61■■□□□ 1.69
SRRT-218ENST00000620394 AFAP1L1Q8TED9 768 aa25.61■■□□□ 1.69
SRRT-218ENST00000620394 EPHX3Q9H6B9 360 aa25.61■■□□□ 1.69
SRRT-218ENST00000620394 VAT1LQ9HCJ6 419 aa25.61■■□□□ 1.69
SRRT-218ENST00000620394 SIP14410 1827 aa25.6■■□□□ 1.69
SRRT-218ENST00000620394 IFIT3O14879 490 aaKnown RBP25.6■■□□□ 1.69
SRRT-218ENST00000620394 TROAPQ12815 778 aa25.6■■□□□ 1.69
SRRT-218ENST00000620394 MB21D2Q8IYB1 491 aaPredicted RBP25.6■■□□□ 1.69
SRRT-218ENST00000620394 RIOX1Q9H6W3 641 aa25.6■■□□□ 1.69
SRRT-218ENST00000620394 SENP2Q9HC62 589 aa25.6■■□□□ 1.69
SRRT-218ENST00000620394 MAP3K20Q9NYL2 800 aaKnown RBP25.6■■□□□ 1.69
SRRT-218ENST00000620394 LPXNO60711 386 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 ANTXR2P58335 489 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 SART3Q15020 963 aaKnown RBP25.59■■□□□ 1.69
SRRT-218ENST00000620394 STXBP2Q15833 593 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 PTGISQ16647 500 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 SAMD3Q8N6K7 520 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 PPP1R13LQ8WUF5 828 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 PXMP2Q9NR77 195 aa25.59■■□□□ 1.69
SRRT-218ENST00000620394 ERICH2A1L162 156 aa25.58■■□□□ 1.69
SRRT-218ENST00000620394 WDR5P61964 334 aaKnown RBP25.58■■□□□ 1.69
SRRT-218ENST00000620394 ARHGAP1Q07960 439 aa25.58■■□□□ 1.69
SRRT-218ENST00000620394 WTAPQ15007 396 aa25.58■■□□□ 1.69
SRRT-218ENST00000620394 SESTD1Q86VW0 696 aa25.58■■□□□ 1.69
SRRT-218ENST00000620394 LMCD1Q9NZU5 365 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms