RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 KLRF2D3W0D1 207 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 PPP1R11O60927 126 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 IGFBP4P22692 258 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 RETREG2Q8NC44 543 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 KAT2BQ92831 832 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 MTMR8Q96EF0 704 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 DDX41Q9UJV9 622 aaKnown RBP24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 TRANK1O15050 2925 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 TTC28Q96AY4 2481 aa24.19■■□□□ 1.46
TRAPPC3-208ENST00000616074 NR3C2P08235 984 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 ACTN1P12814 892 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 HSD17B4P51659 736 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 GHRHRQ02643 423 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 BFSP2Q13515 415 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 PTGISQ16647 500 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 TJAP1Q5JTD0 557 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 SYMPKQ92797 1274 aaKnown RBP24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 CTAGE1Q96RT6 745 aa24.18■■□□□ 1.46
TRAPPC3-208ENST00000616074 ZBTB5O15062 677 aa24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 EIF3JO75822 258 aaKnown RBP24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 CCDC85BQ15834 202 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 GDF6Q6KF10 455 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 SESTD1Q86VW0 696 aa24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 MRVI1Q9Y6F6 885 aa24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 PTPRSQ13332 1948 aa24.17■■□□□ 1.46
TRAPPC3-208ENST00000616074 PALM3A6NDB9 673 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC3-208ENST00000616074 CYP21A2P08686 494 aa24.16■■□□□ 1.46
TRAPPC3-208ENST00000616074 CASTP20810 708 aaKnown RBP24.16■■□□□ 1.46
TRAPPC3-208ENST00000616074 SLC35G1Q2M3R5 365 aa24.16■■□□□ 1.46
TRAPPC3-208ENST00000616074 EMID1Q96A84 441 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC3-208ENST00000616074 FTOQ9C0B1 505 aaKnown RBP eCLIP24.16■■□□□ 1.465e-6■■■□□ 14.7
TRAPPC3-208ENST00000616074 BAZ2BQ9UIF8 2168 aaKnown RBP24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 CA3P07451 260 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 PTH1RQ03431 593 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 TRDNQ13061 729 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 DGKDQ16760 1214 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 TMEM67Q5HYA8 995 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 CAGE1Q8TC20 777 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 SLC9A7Q96T83 725 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 PDCD2LQ9BRP1 358 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 SUPT16HQ9Y5B9 1047 aaKnown RBP24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 PCDHA1Q9Y5I3 950 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 XIRP2A4UGR9 3374 aa24.15■■□□□ 1.46
TRAPPC3-208ENST00000616074 RGS20O76081 388 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 HOXA13P31271 388 aaPredicted RBP24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 GRM4Q14833 912 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 HOMER1Q86YM7 354 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 CCDC155Q8N6L0 562 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 AFAP1L1Q8TED9 768 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 DHX38Q92620 1227 aaKnown RBP24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 SENP2Q9HC62 589 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 MAP3K20Q9NYL2 800 aaKnown RBP24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 THEGQ9P2T0 379 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 GTF2IRD1Q9UHL9 959 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 TAF6LQ9Y6J9 622 aa24.14■■□□□ 1.45
TRAPPC3-208ENST00000616074 MYCLP12524 364 aaPredicted RBP24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 CHMLP26374 656 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 PSEN2P49810 448 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 LAMC2Q13753 1193 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 STOX1Q6ZVD7 989 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 PPTC7Q8NI37 304 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 RUFY2Q8WXA3 655 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 PIGSQ96S52 555 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 ALG1Q9BT22 464 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 HDAC6Q9UBN7 1215 aa24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 U3KPZ7 1027 aaPredicted RBP24.13■■□□□ 1.45
TRAPPC3-208ENST00000616074 IFIT3O14879 490 aaKnown RBP24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 ZNF286BP0CG31 522 aa24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 GPNMBQ14956 572 aa24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 PGM5Q15124 567 aa24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 DHX37Q8IY37 1157 aaKnown RBP24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 IL31RAQ8NI17 732 aa24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 PHOSPHO2Q8TCD6 241 aa24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 ATXN2LQ8WWM7 1075 aaKnown RBP24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 RIOX1Q9H6W3 641 aa24.12■■□□□ 1.45
TRAPPC3-208ENST00000616074 CYTH3O43739 400 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 SORBS3O60504 671 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 F2P00734 622 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 SELPP16109 830 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 MFSD10Q14728 455 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 LRRC8DQ7L1W4 858 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 VSIG10LQ86VR7 867 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 HERC6Q8IVU3 1022 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 C7orf31Q8N865 590 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 KATNAL1Q9BW62 490 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 CERS4Q9HA82 394 aa24.11■■□□□ 1.45
TRAPPC3-208ENST00000616074 ERICH2A1L162 156 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 E7EWF7 191 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 HAS3O00219 553 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 RFXAPO00287 272 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 BAIAP3O94812 1187 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 ARHGEF15O94989 841 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 RBL2Q08999 1139 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 WTAPQ15007 396 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 KIAA0753Q2KHM9 967 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 RALYLQ86SE5 291 aaKnown RBP24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 MICALL1Q8N3F8 863 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 SAMD3Q8N6K7 520 aa24.1■■□□□ 1.45
TRAPPC3-208ENST00000616074 GCOM1H8Y6P7 765 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC3-208ENST00000616074 POLR2MP0CAP2 368 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms