RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	CAGE1	Q8TC20	777 aa		12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	PHOSPHO2	Q8TCD6	241 aa		12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	KAT2B	Q92831	832 aa		12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	YTHDC1	Q96MU7	727 aa	Known RBP	12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	CTAGE1	Q96RT6	745 aa		12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	MAD2L2	Q9UI95	211 aa		12.96	□□□□□ -0.33
CBWD1-222	ENST00000613508	DHX16	O60231	1041 aa	Known RBP	12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	PPP1R11	O60927	126 aa	Predicted RBP	12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	PARN	O95453	639 aa	Known RBP	12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	NR3C2	P08235	984 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	CAST	P20810	708 aa	Known RBP	12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	LAMC2	Q13753	1193 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	PTGIS	Q16647	500 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	DGKD	Q16760	1214 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	KCNV1	Q6PIU1	500 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	RETREG2	Q8NC44	543 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	PPTC7	Q8NI37	304 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	AFAP1L1	Q8TED9	768 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	RUFY2	Q8WXA3	655 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	SLC9A7	Q96T83	725 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	RIOX1	Q9H6W3	641 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	VAT1L	Q9HCJ6	419 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508		U3KPZ7	1027 aa	Predicted RBP	12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	KIAA1217	Q5T5P2	1943 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	TANC1	Q9C0D5	1861 aa		12.95	□□□□□ -0.34
CBWD1-222	ENST00000613508	GBF1	Q92538	1859 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	ZBBX	A8MT70	800 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	HAS3	O00219	553 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	BAIAP3	O94812	1187 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	F2	P00734	622 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	CFB	P00751	764 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	CYP21A2	P08686	494 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	TGFB3	P10600	412 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	EIF2AK2	P19525	551 aa	Known RBP	12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	POU3F3	P20264	500 aa	Predicted RBP	12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	CHML	P26374	656 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	RABGGTB	P53611	331 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	TRDN	Q13061	729 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	GRM4	Q14833	912 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	SLC35G1	Q2M3R5	365 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	PPP2R2D	Q66LE6	453 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	GDF6	Q6KF10	455 aa	Predicted RBP	12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	DEFB128	Q7Z7B8	93 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	VSIG10L	Q86VR7	867 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	CCDC155	Q8N6L0	562 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	PDCD2L	Q9BRP1	358 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	GTF2IRD1	Q9UHL9	959 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	NOD1	Q9Y239	953 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	PCDHA1	Q9Y5I3	950 aa		12.94	□□□□□ -0.34
CBWD1-222	ENST00000613508	PPFIA4	O75335	1185 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	RGS20	O76081	388 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	MYOG	P15173	224 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	TROAP	Q12815	778 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	GPNMB	Q14956	572 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	TMEM67	Q5HYA8	995 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	MYSM1	Q5VVJ2	828 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	KATNAL1	Q9BW62	490 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	THEG	Q9P2T0	379 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	MRVI1	Q9Y6F6	885 aa		12.93	□□□□□ -0.34
CBWD1-222	ENST00000613508	MYH6	P13533	1939 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	SGSM2	O43147	1006 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	CXCL10	P02778	98 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	SELP	P16109	830 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	PTH1R	Q03431	593 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	SCN5A	Q14524	2016 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	CHST3	Q7LGC8	479 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	HERC6	Q8IVU3	1022 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	PPP1R13L	Q8WUF5	828 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	DHX38	Q92620	1227 aa	Known RBP	12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	ASB2	Q96Q27	587 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	MAP3K14	Q99558	947 aa		12.92	□□□□□ -0.34
CBWD1-222	ENST00000613508	MYO9B	Q13459	2157 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	FRMPD4	Q14CM0	1322 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	PNMA6F	A0A0J9YX94	578 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	ERICH2	A1L162	156 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508		E7EWF7	191 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	IFIT3	O14879	490 aa	Known RBP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	CYTH3	O43739	400 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	CA3	P07451	260 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	POLR2M	P0CAP2	368 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	IGFBP4	P22692	258 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	PSEN2	P49810	448 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	PTK7	Q13308	1070 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	SART3	Q15020	963 aa	Known RBP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	PGM5	Q15124	567 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	CELF3	Q5SZQ8	465 aa	Known RBP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	LRRC8D	Q7L1W4	858 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	RALYL	Q86SE5	291 aa	Known RBP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	DHX37	Q8IY37	1157 aa	Known RBP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	C7orf31	Q8N865	590 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	NCOA7	Q8NI08	942 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	MAP4K1	Q92918	833 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	PIGS	Q96S52	555 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	MTA3	Q9BTC8	594 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	PRDM6	Q9NQX0	595 aa		12.91	□□□□□ -0.34
CBWD1-222	ENST00000613508	HDAC6	Q9UBN7	1215 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms