RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 MGARPQ8TDB4 240 aa15.59■□□□□ 0.09
PCDHB16-201ENST00000609684 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
PCDHB16-201ENST00000609684 ZBED6P86452 979 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 ZSCAN26Q16670 478 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 ANKRD42Q8N9B4 389 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 OXER1Q8TDS5 423 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 PDE11AQ9HCR9 933 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 GDAQ9Y2T3 454 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 CPDO75976 1380 aa15.58■□□□□ 0.09
PCDHB16-201ENST00000609684 NMT2O60551 498 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 SEC31AO94979 1220 aaKnown RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 HSPA1LP34931 641 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 ADCY8P40145 1251 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 ATP1A2P50993 1020 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 KRT31Q15323 416 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 CPVLQ9H3G5 476 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 MKRN1Q9UHC7 482 aaKnown RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 PPFIA4O75335 1185 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 TMEM191BP0C7N4 346 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 ATF7P17544 494 aaPredicted RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 SARM1Q6SZW1 724 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 SEPT12Q8IYM1 358 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 FMR1NBQ8N0W7 255 aaPredicted RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 NACC1Q96RE7 527 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 KRT12Q99456 494 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 LMNB1P20700 586 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 CASP1P29466 404 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 NSFP46459 744 aaKnown RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 RABL6Q3YEC7 729 aaPredicted RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 ATP6V0A1Q93050 837 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 NT5C1BQ96P26 610 aa15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 DCP1AQ9NPI6 582 aaPredicted RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 SEPT9Q9UHD8 586 aaPredicted RBP15.58■□□□□ 0.08
PCDHB16-201ENST00000609684 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 TMEM47Q9BQJ4 181 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 SH3GLB2Q9NR46 395 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 ARHGAP25P42331 645 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 NT5C2P49902 561 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 CUL4BQ13620 913 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 PFKFB3Q16875 520 aaPredicted RBP15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 TCP11X2Q5H9J9 407 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 FAM133AQ8N9E0 248 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 RSAD2Q8WXG1 361 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 NRBP2Q9NSY0 501 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 SPTLC3Q9NUV7 552 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 GOLGA8KD6RF30 607 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 LRRN2O75325 713 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 NPR1P16066 1061 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 MESDQ14696 234 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 SLC44A5Q8NCS7 719 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 UHMK1Q8TAS1 419 aaKnown RBP15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 ANO3Q9BYT9 981 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 GSG1L2A8MUP6 293 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 M0QZ92 97 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 ALX1Q15699 326 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 LGSNQ5TDP6 509 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 STOX1Q6ZVD7 989 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 PANX2Q96RD6 677 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 MED4Q9NPJ6 270 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 PTPRMP28827 1452 aa15.57■□□□□ 0.08
PCDHB16-201ENST00000609684 ZMYND10O75800 440 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 NDUFA10O95299 355 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 HOXA13P31271 388 aaPredicted RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 EIF4A3P38919 411 aaKnown RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 CYP27A1Q02318 531 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 TBC1D9BQ66K14 1250 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 SULF1Q8IWU6 871 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 GRK7Q8WTQ7 553 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 STMN2Q93045 179 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 MMS19Q96T76 1030 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 NDST4Q9H3R1 872 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 CACNB3P54284 484 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 MFAP3P55082 362 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 PTK2Q05397 1052 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 SCYL2Q6P3W7 929 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 PCIF1Q9H4Z3 704 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 NHEJ1Q9H9Q4 299 aaPredicted RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 PPRC1Q5VV67 1664 aaKnown RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 STAM2O75886 525 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 MMP10P09238 476 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 PIK3CAP42336 1068 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 CLEC17AQ6ZS10 378 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 CTAGE3PQ8IX95 158 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 ZNF579Q8NAF0 562 aaKnown RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 SNAP25P60880 206 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 PSMD2Q13200 908 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 HADHQ16836 314 aaKnown RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 TSGA10IPQ3SY00 556 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 BSPRYQ5W0U4 402 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 MIGA2Q7L4E1 593 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 ADPGKQ9BRR6 497 aa15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 ALDH8A1Q9H2A2 487 aaPredicted RBP15.56■□□□□ 0.08
PCDHB16-201ENST00000609684 USP17L5A8MUK1 530 aa15.55■□□□□ 0.08
PCDHB16-201ENST00000609684 STX2P32856 288 aa15.55■□□□□ 0.08
PCDHB16-201ENST00000609684 SEPT2Q15019 361 aa15.55■□□□□ 0.08
PCDHB16-201ENST00000609684 GEN1Q17RS7 908 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms