RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SORBS3O60504 671 aa17.32■□□□□ 0.36
CTSA-216ENST00000607212 MYCLP12524 364 aaPredicted RBP17.32■□□□□ 0.36
CTSA-216ENST00000607212 DGKDQ16760 1214 aa17.32■□□□□ 0.36
CTSA-216ENST00000607212 ENAHQ8N8S7 591 aaPredicted RBP17.32■□□□□ 0.36
CTSA-216ENST00000607212 CAGE1Q8TC20 777 aa17.32■□□□□ 0.36
CTSA-216ENST00000607212 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
CTSA-216ENST00000607212 CNNM2Q9H8M5 875 aa17.32■□□□□ 0.36
CTSA-216ENST00000607212 PRUNE2Q8WUY3 3088 aa17.32■□□□□ 0.36
CTSA-216ENST00000607212 TLL1O43897 1013 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 GDF6Q6KF10 455 aaPredicted RBP17.31■□□□□ 0.36
CTSA-216ENST00000607212 HERC6Q8IVU3 1022 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 SMC5Q8IY18 1101 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 PHOSPHO2Q8TCD6 241 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 VWCEQ96DN2 955 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 DSCC1Q9BVC3 393 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 ZSWIM5Q9P217 1185 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
CTSA-216ENST00000607212 BAIAP3O94812 1187 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 PSEN2P49810 448 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 NUCB1Q02818 461 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 ARHGAP1Q07960 439 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 AAK1Q2M2I8 961 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 LRRC8DQ7L1W4 858 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
CTSA-216ENST00000607212 AFAP1L1Q8TED9 768 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 KATNAL1Q9BW62 490 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 JMJD4Q9H9V9 463 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 TET1Q8NFU7 2136 aa17.3■□□□□ 0.36
CTSA-216ENST00000607212 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
CTSA-216ENST00000607212 IGHDP01880 384 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 NR3C2P08235 984 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 ZNF286BP0CG31 522 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 SELPP16109 830 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 TRDNQ13061 729 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 ANKS1AQ92625 1134 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 MAF1Q9H063 256 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 PXMP2Q9NR77 195 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 HDAC6Q9UBN7 1215 aa17.29■□□□□ 0.36
CTSA-216ENST00000607212 KLRF2D3W0D1 207 aa17.28■□□□□ 0.36
CTSA-216ENST00000607212 TFF2Q03403 129 aa17.28■□□□□ 0.36
CTSA-216ENST00000607212 LAMC2Q13753 1193 aa17.28■□□□□ 0.36
CTSA-216ENST00000607212 MFSD10Q14728 455 aa17.28■□□□□ 0.36
CTSA-216ENST00000607212 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
CTSA-216ENST00000607212 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
CTSA-216ENST00000607212 DDX41Q9UJV9 622 aaKnown RBP17.28■□□□□ 0.36
CTSA-216ENST00000607212 ERICH2A1L162 156 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 COL9A1P20849 921 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.36
CTSA-216ENST00000607212 WDR5P61964 334 aaKnown RBP17.27■□□□□ 0.36
CTSA-216ENST00000607212 TAP1Q03518 808 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 KRT40Q6A162 431 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 KAT2BQ92831 832 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 SPATA33Q96N06 139 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 GTF2IRD1Q9UHL9 959 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 MTCH2Q9Y6C9 303 aa17.27■□□□□ 0.36
CTSA-216ENST00000607212 EPOPA6NHQ4 379 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 PARNO95453 639 aaKnown RBP17.26■□□□□ 0.35
CTSA-216ENST00000607212 CKBP12277 381 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 FAM117BQ6P1L5 589 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 CNKSR3Q6P9H4 555 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 TMCO2Q7Z6W1 182 aaPredicted RBP17.26■□□□□ 0.35
CTSA-216ENST00000607212 SESTD1Q86VW0 696 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 FCHSD1Q86WN1 690 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 PPTC7Q8NI37 304 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 NECAB3Q96P71 396 aaPredicted RBP17.26■□□□□ 0.35
CTSA-216ENST00000607212 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
CTSA-216ENST00000607212 PRRC2BQ5JSZ5 2229 aaKnown RBP17.26■□□□□ 0.35
CTSA-216ENST00000607212 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 ZBTB5O15062 677 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 GGPS1O95749 300 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 CCND2P30279 289 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 KCNV1Q6PIU1 500 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
CTSA-216ENST00000607212 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 DHX38Q92620 1227 aaKnown RBP17.25■□□□□ 0.35
CTSA-216ENST00000607212 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
CTSA-216ENST00000607212 PDCD2LQ9BRP1 358 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 MLXIPQ9HAP2 919 aa17.25■□□□□ 0.35
CTSA-216ENST00000607212 TTC28Q96AY4 2481 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 COL4A4P53420 1690 aaPredicted RBP17.24■□□□□ 0.35
CTSA-216ENST00000607212 GCOM1H8Y6P7 765 aaPredicted RBP17.24■□□□□ 0.35
CTSA-216ENST00000607212 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
CTSA-216ENST00000607212 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 POLR2MP0CAP2 368 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 HSD17B4P51659 736 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 KCNQ1P51787 676 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 DEFB103AP81534 67 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 TRAF1Q13077 416 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 PTK7Q13308 1070 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 GRB10Q13322 594 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 IKBKEQ14164 716 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 CYB5R4Q7L1T6 521 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 GDPD5Q8WTR4 605 aa17.24■□□□□ 0.35
CTSA-216ENST00000607212 EMID1Q96A84 441 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms