RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 TROAPQ12815 778 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 SART3Q15020 963 aaKnown RBP11.12□□□□□ -0.63
HCG18-247ENST00000602698 LY6KQ17RY6 165 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 FAM47CQ5HY64 1035 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 CHST3Q7LGC8 479 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
HCG18-247ENST00000602698 MB21D2Q8IYB1 491 aaPredicted RBP11.12□□□□□ -0.63
HCG18-247ENST00000602698 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 AFG1LQ8WV93 481 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 MAP4K1Q92918 833 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 VWCEQ96DN2 955 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 SCLYQ96I15 445 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 RIOX1Q9H6W3 641 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
HCG18-247ENST00000602698 PCDHA1Q9Y5I3 950 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
HCG18-247ENST00000602698 SPTBN5Q9NRC6 3674 aaKnown RBP11.12□□□□□ -0.63
HCG18-247ENST00000602698 KAT6AQ92794 2004 aa11.12□□□□□ -0.63
HCG18-247ENST00000602698 CYTH3O43739 400 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 EIF3JO75822 258 aaKnown RBP11.11□□□□□ -0.63
HCG18-247ENST00000602698 NR3C2P08235 984 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 PFKMP08237 780 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
HCG18-247ENST00000602698 GRIN2CQ14957 1233 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
HCG18-247ENST00000602698 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 EMID1Q96A84 441 aaPredicted RBP11.11□□□□□ -0.63
HCG18-247ENST00000602698 PIGSQ96S52 555 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 PDCD2LQ9BRP1 358 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 ZNF576Q9H609 170 aa11.11□□□□□ -0.63
HCG18-247ENST00000602698 DDX41Q9UJV9 622 aaKnown RBP11.11□□□□□ -0.63
HCG18-247ENST00000602698 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 HOXA13P31271 388 aaPredicted RBP11.1□□□□□ -0.63
HCG18-247ENST00000602698 TRAF1Q13077 416 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 PGM5Q15124 567 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 RAB30Q15771 203 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 KAT2BQ92831 832 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
HCG18-247ENST00000602698 MICAL3Q7RTP6 2002 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 GCOM1H8Y6P7 765 aaPredicted RBP11.09□□□□□ -0.63
HCG18-247ENST00000602698 RGS20O76081 388 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 MYCLP12524 364 aaPredicted RBP11.09□□□□□ -0.63
HCG18-247ENST00000602698 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
HCG18-247ENST00000602698 RFC2P35250 354 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 DGKDQ16760 1214 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 DEFB128Q7Z7B8 93 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 SESTD1Q86VW0 696 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 ZNF654Q8IZM8 581 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 IL31RAQ8NI17 732 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 PPTC7Q8NI37 304 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 CTAGE1Q96RT6 745 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 MAP3K14Q99558 947 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 LSG1Q9H089 658 aaKnown RBP11.09□□□□□ -0.63
HCG18-247ENST00000602698 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 MSRAQ9UJ68 235 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 NOD1Q9Y239 953 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 SLC4A7Q9Y6M7 1214 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 MUC3AQ02505 3323 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
HCG18-247ENST00000602698 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
HCG18-247ENST00000602698 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 PRC1O43663 620 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 DDAH1O94760 285 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 F2P00734 622 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 ZNF286BP0CG31 522 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
HCG18-247ENST00000602698 CCND2P30279 289 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 BFSP2Q13515 415 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 LAMC2Q13753 1193 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 PTGISQ16647 500 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 GDF6Q6KF10 455 aaPredicted RBP11.08□□□□□ -0.64
HCG18-247ENST00000602698 KCNV1Q6PIU1 500 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 CASC1Q6TDU7 716 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 DHX37Q8IY37 1157 aaKnown RBP11.08□□□□□ -0.64
HCG18-247ENST00000602698 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 CAGE1Q8TC20 777 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 ESYT1Q9BSJ8 1104 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 MTA3Q9BTC8 594 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 MYL10Q9BUA6 226 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 KATNAL1Q9BW62 490 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 NKX2-4Q9H2Z4 354 aa11.08□□□□□ -0.64
HCG18-247ENST00000602698 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
HCG18-247ENST00000602698 SH2B2O14492 632 aaPredicted RBP11.07□□□□□ -0.64
HCG18-247ENST00000602698 SLC27A2O14975 620 aa11.07□□□□□ -0.64
HCG18-247ENST00000602698 ACTN1P12814 892 aa11.07□□□□□ -0.64
HCG18-247ENST00000602698 ATP2A2P16615 1042 aaKnown RBP11.07□□□□□ -0.64
HCG18-247ENST00000602698 UBA1P22314 1058 aaKnown RBP11.07□□□□□ -0.64
HCG18-247ENST00000602698 MCM5P33992 734 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms