RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 KCNJ14Q9UNX9 436 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 MTMR6Q9Y217 621 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 CEP290O15078 2479 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 BRD1O95696 1058 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 KRT2P35908 639 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 ALDH5A1P51649 535 aaPredicted RBP16.52■□□□□ 0.24
USE1-210ENST00000601662 ADCY7P51828 1080 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 GUCY1B3Q02153 619 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 BLIDQ8IZY5 108 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 CUL5Q93034 780 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.24
USE1-210ENST00000601662 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
USE1-210ENST00000601662 KBTBD13C9JR72 458 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 EVI5O60447 810 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 LRRC41Q15345 812 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 FBXO16Q8IX29 292 aaPredicted RBP16.51■□□□□ 0.23
USE1-210ENST00000601662 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
USE1-210ENST00000601662 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 TAAR1Q96RJ0 339 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 GJB4Q9NTQ9 266 aa16.51■□□□□ 0.23
USE1-210ENST00000601662 DNM1LO00429 736 aa16.5■□□□□ 0.23
USE1-210ENST00000601662 U2AF2P26368 475 aaKnown RBP eCLIP16.5■□□□□ 0.23
USE1-210ENST00000601662 ADCYAP1R1P41586 468 aa16.5■□□□□ 0.23
USE1-210ENST00000601662 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
USE1-210ENST00000601662 PDE4DQ08499 809 aa16.5■□□□□ 0.23
USE1-210ENST00000601662 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
USE1-210ENST00000601662 DIS3L2Q8IYB7 885 aaKnown RBP16.5■□□□□ 0.23
USE1-210ENST00000601662 KATNBL1Q9H079 304 aa16.5■□□□□ 0.23
USE1-210ENST00000601662 COL20A1Q9P218 1284 aa16.5■□□□□ 0.23
USE1-210ENST00000601662 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 BTBD18B2RXH4 712 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 GCOM1H8Y6P7 765 aaPredicted RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 PIK3CDO00329 1044 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 ADCY6O43306 1168 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 F13A1P00488 732 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 COL6A1P12109 1028 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 HOXA13P31271 388 aaPredicted RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 IRX5P78411 483 aaPredicted RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 RNF180Q86T96 592 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 REXO1Q8N1G1 1221 aaKnown RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 DNERQ8NFT8 737 aa16.49■□□□□ 0.23
USE1-210ENST00000601662 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
USE1-210ENST00000601662 B4DLN1 442 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 H0YGN5 161 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 OPLAHO14841 1288 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
USE1-210ENST00000601662 C6orf222P0C671 652 aaPredicted RBP16.48■□□□□ 0.23
USE1-210ENST00000601662 PTGS1P23219 599 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 PKP1Q13835 747 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 PRPF38BQ5VTL8 546 aaKnown RBP16.48■□□□□ 0.23
USE1-210ENST00000601662 ARHGEF16Q5VV41 709 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 TAPT1Q6NXT6 567 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 KRT25Q7Z3Z0 450 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 FCHSD1Q86WN1 690 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 NOSTRINQ8IVI9 506 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 C7orf61Q8IZ16 206 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 RMDN3Q96TC7 470 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 SPC25Q9HBM1 224 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 VTA1Q9NP79 307 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 ZDHHC9Q9Y397 364 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 NR2E3Q9Y5X4 410 aa16.48■□□□□ 0.23
USE1-210ENST00000601662 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 FRMPD3Q5JV73 1810 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 LCTP09848 1927 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 CCDC194A0A1B0GVG4 234 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 MYADML2A6NDP7 307 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
USE1-210ENST00000601662 SMPD1P17405 629 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 EIF2AK2P19525 551 aaKnown RBP16.47■□□□□ 0.23
USE1-210ENST00000601662 GHRHRQ02643 423 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 NPY5RQ15761 445 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 LRRC26Q2I0M4 334 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 NSUN6Q8TEA1 469 aaKnown RBP16.47■□□□□ 0.23
USE1-210ENST00000601662 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
USE1-210ENST00000601662 M0R2N6 131 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 MEIS2O14770 477 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 CLK2P49760 499 aaKnown RBP16.46■□□□□ 0.23
USE1-210ENST00000601662 HSD17B4P51659 736 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 RESTQ13127 1097 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
USE1-210ENST00000601662 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 IQSEC1Q6DN90 963 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 OXER1Q8TDS5 423 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
USE1-210ENST00000601662 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
USE1-210ENST00000601662 LOC102724159A0A0B4J2E5 919 aa16.45■□□□□ 0.22
USE1-210ENST00000601662 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms