RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 CASKIN2Q8WXE0 1202 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 BAP1Q92560 729 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 TSPY2A6NKD2 308 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 FGFR1OPO95684 399 aaKnown RBP13.91□□□□□ -0.18
ZNF558-205ENST00000597304 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
ZNF558-205ENST00000597304 CCDC40Q4G0X9 1142 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 KRT12Q99456 494 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 TACO1Q9BSH4 297 aaKnown RBP13.91□□□□□ -0.18
ZNF558-205ENST00000597304 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
ZNF558-205ENST00000597304 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 ABCB11O95342 1321 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
ZNF558-205ENST00000597304 DNA2P51530 1060 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 SMTNP53814 917 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 EVX2Q03828 476 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 IFT88Q13099 833 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 DRP2Q13474 957 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 CEP85LQ5SZL2 805 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 CCDC13Q8IYE1 715 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 ARFGAP2Q8N6H7 521 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 DAGLBQ8NCG7 672 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 HPS3Q969F9 1004 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
ZNF558-205ENST00000597304 KLC4Q9NSK0 619 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 PLAAQ9Y263 795 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 ITGB4P16144 1822 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 PALMO75781 387 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 OR52Z1P0C646 297 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 GALNT17Q6IS24 598 aa13.9□□□□□ -0.18
ZNF558-205ENST00000597304 DCCP43146 1447 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 RBAK-RBAKDNI3L0D1 243 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 HPDP32754 393 aaPredicted RBP13.89□□□□□ -0.19
ZNF558-205ENST00000597304 GYG1P46976 350 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 ZKSCAN4Q969J2 545 aaPredicted RBP13.89□□□□□ -0.19
ZNF558-205ENST00000597304 FTCDO95954 541 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 HSPA9P38646 679 aaKnown RBP13.89□□□□□ -0.19
ZNF558-205ENST00000597304 CDR1P51861 262 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 TNNC1P63316 161 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 ATP2B2Q01814 1243 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 SLC9C1Q4G0N8 1177 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 RCSD1Q6JBY9 416 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 GIMAP7Q8NHV1 300 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 EDEM3Q9BZQ6 932 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 TMBIM4Q9HC24 238 aa13.89□□□□□ -0.19
ZNF558-205ENST00000597304 PPANQ9NQ55 473 aaKnown RBP13.89□□□□□ -0.19
ZNF558-205ENST00000597304 ZPR1O75312 459 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 RASSF9O75901 435 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-205ENST00000597304 HGSNATQ68CP4 663 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 CCDC121Q6ZUS5 278 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 SLC4A9Q96Q91 983 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 ACTR5Q9H9F9 607 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-205ENST00000597304 GOLGA6L7A0A1B0GV03 622 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 RAD51CO43502 376 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-205ENST00000597304 MMP14P50281 582 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 NEDD9Q14511 834 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 C6orf89Q6UWU4 347 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 LRIG3Q6UXM1 1119 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.88□□□□□ -0.19
ZNF558-205ENST00000597304 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 INPP4AQ96PE3 977 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-205ENST00000597304 CENPHQ9H3R5 247 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 DCP1AQ9NPI6 582 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-205ENST00000597304 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
ZNF558-205ENST00000597304 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 MYZAPP0CAP1 466 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 GNAQP50148 359 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 LRRC63Q05C16 580 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 SLC40A1Q9NP59 571 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 DONSONQ9NYP3 566 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 ARPP21Q9UBL0 812 aaPredicted RBP13.87□□□□□ -0.19
ZNF558-205ENST00000597304 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 SERPING1P05155 500 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 NAB2Q15742 525 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 LETM2Q2VYF4 491 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 C3orf20Q8ND61 904 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
ZNF558-205ENST00000597304 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms