RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 MMP3P08254 477 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 POLR2MP0CAP2 368 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
CIRBP-240ENST00000592815 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
CIRBP-240ENST00000592815 MB21D2Q8IYB1 491 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-240ENST00000592815 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 VWCEQ96DN2 955 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 MSRAQ9UJ68 235 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 NOD1Q9Y239 953 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
CIRBP-240ENST00000592815 LAMC2Q13753 1193 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 FCHSD1Q86WN1 690 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 SAMD3Q8N6K7 520 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 PDCD2LQ9BRP1 358 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
CIRBP-240ENST00000592815 ZBBXA8MT70 800 aa18.63■□□□□ 0.57
CIRBP-240ENST00000592815 RAB30Q15771 203 aa18.63■□□□□ 0.57
CIRBP-240ENST00000592815 PTGISQ16647 500 aa18.63■□□□□ 0.57
CIRBP-240ENST00000592815 DGKDQ16760 1214 aa18.63■□□□□ 0.57
CIRBP-240ENST00000592815 DHX37Q8IY37 1157 aaKnown RBP18.63■□□□□ 0.57
CIRBP-240ENST00000592815 KAT2BQ92831 832 aa18.63■□□□□ 0.57
CIRBP-240ENST00000592815 EMID1Q96A84 441 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-240ENST00000592815 ZFP91Q96JP5 570 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-240ENST00000592815 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
CIRBP-240ENST00000592815 PRC1O43663 620 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 SORBS3O60504 671 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 RGS20O76081 388 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 PGM5Q15124 567 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 IL31RAQ8NI17 732 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 ESYT1Q9BSJ8 1104 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 MYL10Q9BUA6 226 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 LY9Q9HBG7 655 aa18.62■□□□□ 0.57
CIRBP-240ENST00000592815 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 PFKMP08237 780 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 IQCF3P0C7M6 154 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 CCND2P30279 289 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 RABGGTBP53611 331 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 BFSP2Q13515 415 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 GDF6Q6KF10 455 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-240ENST00000592815 KCNV1Q6PIU1 500 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 NFXL1Q6ZNB6 911 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 ZNF654Q8IZM8 581 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 PPTC7Q8NI37 304 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 CTCFLQ8NI51 663 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-240ENST00000592815 NKX2-4Q9H2Z4 354 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 SCN10AQ9Y5Y9 1956 aa18.61■□□□□ 0.57
CIRBP-240ENST00000592815 BAZ2BQ9UIF8 2168 aaKnown RBP18.6■□□□□ 0.57
CIRBP-240ENST00000592815 SLC27A2O14975 620 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 KIF5BP33176 963 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 MCM5P33992 734 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 RFC2P35250 354 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 PSEN2P49810 448 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 CELF3Q5SZQ8 465 aaKnown RBP18.6■□□□□ 0.57
CIRBP-240ENST00000592815 MYSM1Q5VVJ2 828 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 SESTD1Q86VW0 696 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 TMTC2Q8N394 836 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 C7orf31Q8N865 590 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
CIRBP-240ENST00000592815 SPATA33Q96N06 139 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 MAP3K14Q99558 947 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 FTOQ9C0B1 505 aaKnown RBP eCLIP18.6■□□□□ 0.57
CIRBP-240ENST00000592815 PRDM12Q9H4Q4 367 aa18.6■□□□□ 0.57
CIRBP-240ENST00000592815 YBX2Q9Y2T7 364 aaKnown RBP18.6■□□□□ 0.57
CIRBP-240ENST00000592815 MYH6P13533 1939 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 DDAH1O94760 285 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 GGPS1O95749 300 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 ZNF286BP0CG31 522 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 TGFB3P10600 412 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 ACTN1P12814 892 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 ATP2A2P16615 1042 aaKnown RBP18.59■□□□□ 0.57
CIRBP-240ENST00000592815 SP2Q02086 613 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 CREB3L3Q68CJ9 461 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 CTAGE1Q96RT6 745 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 LZTS2Q9BRK4 669 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 MTA3Q9BTC8 594 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 SLC28A3Q9HAS3 691 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 HDAC6Q9UBN7 1215 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 CUL9Q8IWT3 2517 aa18.59■□□□□ 0.57
CIRBP-240ENST00000592815 CDH23Q9H251 3354 aa18.58■□□□□ 0.57
CIRBP-240ENST00000592815 UNC80Q8N2C7 3258 aa18.58■□□□□ 0.57
CIRBP-240ENST00000592815 SH2B2O14492 632 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-240ENST00000592815 MYOGP15173 224 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-240ENST00000592815 MFSD10Q14728 455 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 NECTIN1Q15223 517 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 KIAA0753Q2KHM9 967 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 CCDC155Q8N6L0 562 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 GPKOWQ92917 476 aaPredicted RBP eCLIP18.58■□□□□ 0.56
CIRBP-240ENST00000592815 TMEM87BQ96K49 555 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 GAS2L1Q99501 681 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-240ENST00000592815 KATNAL1Q9BW62 490 aa18.58■□□□□ 0.56
CIRBP-240ENST00000592815 SPZ1Q9BXG8 430 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms