RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 MMP3P08254 477 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 POLR2MP0CAP2 368 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 RFC2P35250 354 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 BFSP2Q13515 415 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 LAMC2Q13753 1193 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 DGKDQ16760 1214 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 OTOP2Q7RTS6 562 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.64■□□□□ 0.25
MBD1-220ENST00000589758 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
MBD1-220ENST00000589758 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 IGDCC4Q8TDY8 1250 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 SCLYQ96I15 445 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 TAF6LQ9Y6J9 622 aa16.64■□□□□ 0.25
MBD1-220ENST00000589758 CYTH3O43739 400 aa16.63■□□□□ 0.25
MBD1-220ENST00000589758 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
MBD1-220ENST00000589758 ANTXR2P58335 489 aa16.63■□□□□ 0.25
MBD1-220ENST00000589758 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
MBD1-220ENST00000589758 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
MBD1-220ENST00000589758 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
MBD1-220ENST00000589758 TMTC2Q8N394 836 aa16.63■□□□□ 0.25
MBD1-220ENST00000589758 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
MBD1-220ENST00000589758 CXXC1Q9P0U4 656 aaPredicted RBP16.63■□□□□ 0.25
MBD1-220ENST00000589758 COL6A3P12111 3177 aa16.63■□□□□ 0.25
MBD1-220ENST00000589758 GRXCR1A8MXD5 290 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 DDAH1O94760 285 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 TGFB3P10600 412 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 SMARCA1P28370 1054 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 CCND2P30279 289 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 HOXA13P31271 388 aaPredicted RBP16.62■□□□□ 0.25
MBD1-220ENST00000589758 KIF5BP33176 963 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 MCM5P33992 734 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 PBX2P40425 430 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 CHMP4BP1P59074 171 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 PGM5Q15124 567 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 VSIG10LQ86VR7 867 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 CCDC155Q8N6L0 562 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 PPTC7Q8NI37 304 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 LZTS2Q9BRK4 669 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 KATNAL1Q9BW62 490 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
MBD1-220ENST00000589758 IQCF3P0C7M6 154 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 ACTN1P12814 892 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 PTGISQ16647 500 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 KAT2BQ92831 832 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
MBD1-220ENST00000589758 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
MBD1-220ENST00000589758 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 PRC1O43663 620 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 PPFIA4O75335 1185 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 STAM2O75886 525 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 GNAQP50148 359 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 DEFB128Q7Z7B8 93 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 FCHSD1Q86WN1 690 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 AFAP1L1Q8TED9 768 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
MBD1-220ENST00000589758 GAS2L1Q99501 681 aaPredicted RBP16.6■□□□□ 0.25
MBD1-220ENST00000589758 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
MBD1-220ENST00000589758 CCDC69A6NI79 296 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 RGS20O76081 388 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 PARNO95453 639 aaKnown RBP16.59■□□□□ 0.25
MBD1-220ENST00000589758 CALM1P0DP23 149 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 CALM2P0DP24 149 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 CALM3P0DP25 149 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 LIFRP42702 1097 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 PSEN2P49810 448 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 CELF3Q5SZQ8 465 aaKnown RBP16.59■□□□□ 0.25
MBD1-220ENST00000589758 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 C7orf31Q8N865 590 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 SLC28A3Q9HAS3 691 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
MBD1-220ENST00000589758 PCDHA11Q9Y5I1 949 aa16.59■□□□□ 0.25
MBD1-220ENST00000589758 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.25
MBD1-220ENST00000589758 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.25
MBD1-220ENST00000589758 HAS3O00219 553 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 SH2B2O14492 632 aaPredicted RBP16.58■□□□□ 0.24
MBD1-220ENST00000589758 SLC27A2O14975 620 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 F2P00734 622 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.24
MBD1-220ENST00000589758 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
MBD1-220ENST00000589758 MFSD10Q14728 455 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
MBD1-220ENST00000589758 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
MBD1-220ENST00000589758 IL31RAQ8NI17 732 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms