RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 DLL1O00548 723 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 MMP3P08254 477 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 CYP2C9P11712 490 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
NFIC-205ENST00000588839 TROAPQ12815 778 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
NFIC-205ENST00000588839 DGKDQ16760 1214 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 LY6KQ17RY6 165 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 MAFAQ8NHW3 353 aaPredicted RBP17.09■□□□□ 0.33
NFIC-205ENST00000588839 AFG1LQ8WV93 481 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 PIGSQ96S52 555 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 MSRAQ9UJ68 235 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
NFIC-205ENST00000588839 PNMA6FA0A0J9YX94 578 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
NFIC-205ENST00000588839 PITPNM1O00562 1244 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 PPP1R11O60927 126 aaPredicted RBP17.08■□□□□ 0.32
NFIC-205ENST00000588839 POLR2MP0CAP2 368 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 KIF5BP33176 963 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 RFC2P35250 354 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 CHMP4BP1P59074 171 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 ARHGAP1Q07960 439 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 BFSP2Q13515 415 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 STOX1Q6ZVD7 989 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.08■□□□□ 0.32
NFIC-205ENST00000588839 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
NFIC-205ENST00000588839 EMID1Q96A84 441 aaPredicted RBP17.08■□□□□ 0.32
NFIC-205ENST00000588839 MTA3Q9BTC8 594 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 PBX4Q9BYU1 374 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 ZNF576Q9H609 170 aa17.08■□□□□ 0.32
NFIC-205ENST00000588839 OPLAHO14841 1288 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 DDAH1O94760 285 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 MYCLP12524 364 aaPredicted RBP17.07■□□□□ 0.32
NFIC-205ENST00000588839 ACTN1P12814 892 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 LAMC2Q13753 1193 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
NFIC-205ENST00000588839 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 SCLYQ96I15 445 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 MAP3K14Q99558 947 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 PDCD2LQ9BRP1 358 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
NFIC-205ENST00000588839 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 CHD9Q3L8U1 2897 aa17.07■□□□□ 0.32
NFIC-205ENST00000588839 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 GRXCR1A8MXD5 290 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 CCND2P30279 289 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 HOXA13P31271 388 aaPredicted RBP17.06■□□□□ 0.32
NFIC-205ENST00000588839 MCM5P33992 734 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 PGM5Q15124 567 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 PTGISQ16647 500 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 DHX37Q8IY37 1157 aaKnown RBP17.06■□□□□ 0.32
NFIC-205ENST00000588839 PPTC7Q8NI37 304 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 LZTS2Q9BRK4 669 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 CXXC1Q9P0U4 656 aaPredicted RBP17.06■□□□□ 0.32
NFIC-205ENST00000588839 SEC63Q9UGP8 760 aaKnown RBP17.06■□□□□ 0.32
NFIC-205ENST00000588839 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
NFIC-205ENST00000588839 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 PRC1O43663 620 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 CYTH3O43739 400 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 TGFB3P10600 412 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 GNAQP50148 359 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 ANTXR2P58335 489 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 GRIN2CQ14957 1233 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 SESTD1Q86VW0 696 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
NFIC-205ENST00000588839 TMEM87BQ96K49 555 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 GAS2L1Q99501 681 aaPredicted RBP17.05■□□□□ 0.32
NFIC-205ENST00000588839 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 LY9Q9HBG7 655 aa17.05■□□□□ 0.32
NFIC-205ENST00000588839 CALM1P0DP23 149 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 CALM2P0DP24 149 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 CALM3P0DP25 149 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 PBX2P40425 430 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 SLC35G1Q2M3R5 365 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 DEFB128Q7Z7B8 93 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 CUL5Q93034 780 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 SPZ1Q9BXG8 430 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 LSG1Q9H089 658 aaKnown RBP17.04■□□□□ 0.32
NFIC-205ENST00000588839 SLC28A3Q9HAS3 691 aa17.04■□□□□ 0.32
NFIC-205ENST00000588839 STAM2O75886 525 aa17.03■□□□□ 0.32
NFIC-205ENST00000588839 IQCF3P0C7M6 154 aa17.03■□□□□ 0.32
NFIC-205ENST00000588839 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
NFIC-205ENST00000588839 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
NFIC-205ENST00000588839 RNF20Q5VTR2 975 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms