RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.34□□□□□ -0.755e-7■■■■□ 24.2
CIRBP-218ENST00000588344 RNF208Q9H0X6 261 aa10.34□□□□□ -0.75
CIRBP-218ENST00000588344 SPC25Q9HBM1 224 aa10.34□□□□□ -0.75
CIRBP-218ENST00000588344 PAK6Q9NQU5 681 aaPredicted RBP10.34□□□□□ -0.75
CIRBP-218ENST00000588344 DDX20Q9UHI6 824 aaKnown RBP10.34□□□□□ -0.75
CIRBP-218ENST00000588344 ZHX1Q9UKY1 873 aaPredicted RBP10.34□□□□□ -0.75
CIRBP-218ENST00000588344 ZNF236Q9UL36 1845 aa10.34□□□□□ -0.75
CIRBP-218ENST00000588344 FIBPO43427 364 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 DUSP11O75319 330 aaKnown RBP10.33□□□□□ -0.76
CIRBP-218ENST00000588344 GCFC2P16383 781 aaKnown RBP10.33□□□□□ -0.76
CIRBP-218ENST00000588344 U2AF2P26368 475 aaKnown RBP eCLIP10.33□□□□□ -0.76
CIRBP-218ENST00000588344 ICAM3P32942 547 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 CIITAP33076 1130 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 ANP32AP39687 249 aaKnown RBP10.33□□□□□ -0.76
CIRBP-218ENST00000588344 MRPS9P82933 396 aaKnown RBP10.33□□□□□ -0.76
CIRBP-218ENST00000588344 TNFAIP2Q03169 654 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 CEP55Q53EZ4 464 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 PRAMEF19Q5SWL8 479 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 TAPT1Q6NXT6 567 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 MOXD1Q6UVY6 613 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 ARRDC4Q8NCT1 418 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 CRYGNQ8WXF5 182 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 GPRASP2Q96D09 838 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 SHISA4Q96DD7 197 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 WDR11Q9BZH6 1224 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 KATNBL1Q9H079 304 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 JADE2Q9NQC1 790 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 TMEM260Q9NX78 707 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 DAXXQ9UER7 740 aaPredicted RBP10.33□□□□□ -0.76
CIRBP-218ENST00000588344 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
CIRBP-218ENST00000588344 CYP3A7-CYP3A51PA0A087WV96 503 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 BTBD18B2RXH4 712 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 SPATA31C2B4DYI2 1134 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 MEIS1O00470 390 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 SGPL1O95470 568 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 CYP3A7P24462 503 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 GJA8P48165 433 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 TRAPPC10P48553 1259 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 SETQ01105 290 aaPredicted RBP10.32□□□□□ -0.76
CIRBP-218ENST00000588344 TRIM32Q13049 653 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 MTMR1Q13613 665 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 NEDD9Q14511 834 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 DUSP28Q4G0W2 176 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 BRDTQ58F21 947 aaPredicted RBP10.32□□□□□ -0.76
CIRBP-218ENST00000588344 PPP4R3AQ6IN85 833 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 EEPD1Q7L9B9 569 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 FBXO16Q8IX29 292 aaPredicted RBP10.32□□□□□ -0.76
CIRBP-218ENST00000588344 TRPV1Q8NER1 839 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 ABHD8Q96I13 439 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 MXRA8Q9BRK3 442 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 AP5M1Q9H0R1 490 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 MRVI1Q9Y6F6 885 aa10.32□□□□□ -0.76
CIRBP-218ENST00000588344 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 ZEB2O60315 1214 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 TFRCP02786 760 aaKnown RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 TXNP10599 105 aaKnown RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 ITGB5P18084 799 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 CCND3P30281 292 aaPredicted RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 NKX3-2P78367 333 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 GUCY1B3Q02153 619 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 ORC2Q13416 577 aaPredicted RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 MTFR1Q15390 333 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 LHX8Q68G74 356 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 CCDC62Q6P9F0 684 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 SEPT14Q6ZU15 432 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 PIK3AP1Q6ZUJ8 805 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 NEK8Q86SG6 692 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 RNF180Q86T96 592 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 NOSTRINQ8IVI9 506 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 ANKLE1Q8NAG6 615 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 IL31RAQ8NI17 732 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 TNFRSF25Q93038 417 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 EMID1Q96A84 441 aaPredicted RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 DEFB118Q96PH6 123 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 ZSCAN16Q9H4T2 348 aaPredicted RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 GJB4Q9NTQ9 266 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 RTEL1Q9NZ71 1219 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 NOL7Q9UMY1 257 aaKnown RBP10.31□□□□□ -0.76
CIRBP-218ENST00000588344 CASP8AP2Q9UKL3 1982 aa10.31□□□□□ -0.76
CIRBP-218ENST00000588344 KPNA6O60684 536 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 DTNBO60941 627 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 RGS20O76081 388 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 GH1P01241 217 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 SYT1P21579 422 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 ADCYAP1R1P41586 468 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 CPT1AP50416 773 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 GJA9P57773 515 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 NR5A1Q13285 461 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 Q4G0T1 1027 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 MCTP1Q6DN14 999 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 BRAPQ7Z569 592 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 DHX37Q8IY37 1157 aaKnown RBP10.3□□□□□ -0.76
CIRBP-218ENST00000588344 RASGRP4Q8TDF6 673 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 OXER1Q8TDS5 423 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 U2AF1L4Q8WU68 220 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms