RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 TRIP12Q14669 1992 aaPredicted RBP19.6■□□□□ 0.73
LINC01842-201ENST00000588275 RFXAPO00287 272 aa19.59■□□□□ 0.73
LINC01842-201ENST00000588275 MRPS5P82675 430 aaKnown RBP19.59■□□□□ 0.73
LINC01842-201ENST00000588275 SKIV2LQ15477 1246 aaKnown RBP19.59■□□□□ 0.73
LINC01842-201ENST00000588275 EXOC6Q8TAG9 804 aa19.59■□□□□ 0.73
LINC01842-201ENST00000588275 ANKS1AQ92625 1134 aa19.59■□□□□ 0.73
LINC01842-201ENST00000588275 IWS1Q96ST2 819 aa19.59■□□□□ 0.73
LINC01842-201ENST00000588275 CTNNA3Q9UI47 895 aa19.59■□□□□ 0.73
LINC01842-201ENST00000588275 MRVI1Q9Y6F6 885 aa19.59■□□□□ 0.73
LINC01842-201ENST00000588275 TET1Q8NFU7 2136 aa19.58■□□□□ 0.73
LINC01842-201ENST00000588275 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.72
LINC01842-201ENST00000588275 GDF6Q6KF10 455 aaPredicted RBP19.58■□□□□ 0.72
LINC01842-201ENST00000588275 STAG2Q8N3U4 1231 aa19.58■□□□□ 0.72
LINC01842-201ENST00000588275 ADAMTS19Q8TE59 1207 aa19.58■□□□□ 0.72
LINC01842-201ENST00000588275 ALG1Q9BT22 464 aa19.58■□□□□ 0.72
LINC01842-201ENST00000588275 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
LINC01842-201ENST00000588275 KIF28PB7ZC32 967 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 GTPBP6O43824 516 aaPredicted RBP19.57■□□□□ 0.72
LINC01842-201ENST00000588275 SORBS3O60504 671 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 MYCLP12524 364 aaPredicted RBP19.57■□□□□ 0.72
LINC01842-201ENST00000588275 KCNJ6P48051 423 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 DGKDQ16760 1214 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 HERC6Q8IVU3 1022 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 ARNTL2Q8WYA1 636 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 KAT2BQ92831 832 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 AMNQ9BXJ7 453 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 MAF1Q9H063 256 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 PXMP2Q9NR77 195 aa19.57■□□□□ 0.72
LINC01842-201ENST00000588275 NR3C2P08235 984 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 ZNF286BP0CG31 522 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 HOMER1Q86YM7 354 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 C7orf31Q8N865 590 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 PHOSPHO2Q8TCD6 241 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 AFAP1L1Q8TED9 768 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 UHRF1Q96T88 793 aaPredicted RBP19.56■□□□□ 0.72
LINC01842-201ENST00000588275 IL25Q9H293 177 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 DDX41Q9UJV9 622 aaKnown RBP19.56■□□□□ 0.72
LINC01842-201ENST00000588275 MYH7BA7E2Y1 1941 aa19.56■□□□□ 0.72
LINC01842-201ENST00000588275 KLRF2D3W0D1 207 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 EIF3JO75822 258 aaKnown RBP19.55■□□□□ 0.72
LINC01842-201ENST00000588275 BAIAP3O94812 1187 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 SELPP16109 830 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 PSEN2P49810 448 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 LRRC8DQ7L1W4 858 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
LINC01842-201ENST00000588275 HDAC6Q9UBN7 1215 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 GTF2IRD1Q9UHL9 959 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 PTPRSQ13332 1948 aa19.55■□□□□ 0.72
LINC01842-201ENST00000588275 TCF20Q9UGU0 1960 aaKnown RBP19.54■□□□□ 0.72
LINC01842-201ENST00000588275 MUC3AQ02505 3323 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 EPOPA6NHQ4 379 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 TLL1O43897 1013 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 ARHGEF15O94989 841 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 HOXA13P31271 388 aaPredicted RBP19.54■□□□□ 0.72
LINC01842-201ENST00000588275 TFF2Q03403 129 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 TAP1Q03518 808 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 MFSD10Q14728 455 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 CYB5R4Q7L1T6 521 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 TMCO2Q7Z6W1 182 aaPredicted RBP19.54■□□□□ 0.72
LINC01842-201ENST00000588275 SESTD1Q86VW0 696 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 DHX38Q92620 1227 aaKnown RBP19.54■□□□□ 0.72
LINC01842-201ENST00000588275 CTAGE1Q96RT6 745 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 KATNAL1Q9BW62 490 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 PCDHA1Q9Y5I3 950 aa19.54■□□□□ 0.72
LINC01842-201ENST00000588275 PRRC2BQ5JSZ5 2229 aaKnown RBP19.53■□□□□ 0.72
LINC01842-201ENST00000588275 OPLAHO14841 1288 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 ZBTB5O15062 677 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 PPP1R11O60927 126 aaPredicted RBP19.53■□□□□ 0.72
LINC01842-201ENST00000588275 HSD17B4P51659 736 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 TRDNQ13061 729 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 LAMC2Q13753 1193 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 KIAA0753Q2KHM9 967 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 KRT40Q6A162 431 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 ZBED2Q9BTP6 218 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 MTCH2Q9Y6C9 303 aa19.53■□□□□ 0.72
LINC01842-201ENST00000588275 RBAK-RBAKDNI3L0D1 243 aa19.52■□□□□ 0.72
LINC01842-201ENST00000588275 CKBP12277 381 aa19.52■□□□□ 0.72
LINC01842-201ENST00000588275 WDR5P61964 334 aaKnown RBP19.52■□□□□ 0.72
LINC01842-201ENST00000588275 SEC23AQ15436 765 aa19.52■□□□□ 0.72
LINC01842-201ENST00000588275 PPTC7Q8NI37 304 aa19.52■□□□□ 0.72
LINC01842-201ENST00000588275 EMID1Q96A84 441 aaPredicted RBP19.52■□□□□ 0.72
LINC01842-201ENST00000588275 ZFP91Q96JP5 570 aaPredicted RBP19.52■□□□□ 0.72
LINC01842-201ENST00000588275 PDCD2LQ9BRP1 358 aa19.52■□□□□ 0.72
LINC01842-201ENST00000588275 REV3LO60673 3130 aa19.52■□□□□ 0.72
LINC01842-201ENST00000588275 COL4A4P53420 1690 aaPredicted RBP19.52■□□□□ 0.71
LINC01842-201ENST00000588275 TRANK1O15050 2925 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 GGPS1O95749 300 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 F2P00734 622 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 DEFB103AP81534 67 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 CNKSR3Q6P9H4 555 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 SPRED2Q7Z698 418 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 FCHSD1Q86WN1 690 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 IL31RAQ8NI17 732 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 SPATA33Q96N06 139 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 NECAB3Q96P71 396 aaPredicted RBP19.51■□□□□ 0.71
LINC01842-201ENST00000588275 PIGSQ96S52 555 aa19.51■□□□□ 0.71
LINC01842-201ENST00000588275 ERICH2A1L162 156 aa19.5■□□□□ 0.71
LINC01842-201ENST00000588275 LCHNA4D1U4 455 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms