RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 FOSL2P15408 326 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
ZNF540-205ENST00000587220 PTPN11Q06124 597 aaPredicted RBP12.34□□□□□ -0.43
ZNF540-205ENST00000587220 ARHGAP1Q07960 439 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
ZNF540-205ENST00000587220 OTOP2Q7RTS6 562 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 FCHSD1Q86WN1 690 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 MB21D2Q8IYB1 491 aaPredicted RBP12.34□□□□□ -0.43
ZNF540-205ENST00000587220 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 SAMD3Q8N6K7 520 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 RETREG2Q8NC44 543 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 PPP1R13LQ8WUF5 828 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 ESYT1Q9BSJ8 1104 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 WNT8AQ9H1J5 351 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 TTYH1Q9H313 450 aaPredicted RBP12.34□□□□□ -0.43
ZNF540-205ENST00000587220 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
ZNF540-205ENST00000587220 SEC63Q9UGP8 760 aaKnown RBP12.34□□□□□ -0.43
ZNF540-205ENST00000587220 DDAH1O94760 285 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 CCND2P30279 289 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 ANTXR2P58335 489 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 GHRHRQ02643 423 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 LAMC2Q13753 1193 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 DGKDQ16760 1214 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 KCNV1Q6PIU1 500 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 DHX37Q8IY37 1157 aaKnown RBP12.33□□□□□ -0.44
ZNF540-205ENST00000587220 TMTC2Q8N394 836 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 IGDCC4Q8TDY8 1250 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 HERVK_113Q902F9 699 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 RRP36Q96EU6 259 aaKnown RBP12.33□□□□□ -0.44
ZNF540-205ENST00000587220 SCLYQ96I15 445 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 TMEM87BQ96K49 555 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 PDCD2LQ9BRP1 358 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 LY9Q9HBG7 655 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 MSRAQ9UJ68 235 aa12.33□□□□□ -0.44
ZNF540-205ENST00000587220 DDX41Q9UJV9 622 aaKnown RBP12.33□□□□□ -0.44
ZNF540-205ENST00000587220 SCN10AQ9Y5Y9 1956 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 BAZ2BQ9UIF8 2168 aaKnown RBP12.32□□□□□ -0.44
ZNF540-205ENST00000587220 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 GRXCR1A8MXD5 290 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 DLL1O00548 723 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 SLC27A2O14975 620 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 CYTH3O43739 400 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 PFKMP08237 780 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 CALM1P0DP23 149 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 CALM2P0DP24 149 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 CALM3P0DP25 149 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 ACTN1P12814 892 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 GNAQP50148 359 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 BFSP2Q13515 415 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 PGM5Q15124 567 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 RAB30Q15771 203 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 PTGISQ16647 500 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 BMP2KLQ5H9B9 411 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 RASIP1Q5U651 963 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 C7orf31Q8N865 590 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 MAFAQ8NHW3 353 aaPredicted RBP12.32□□□□□ -0.44
ZNF540-205ENST00000587220 CUL5Q93034 780 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
ZNF540-205ENST00000587220 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 KATNAL1Q9BW62 490 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
ZNF540-205ENST00000587220 ZNF576Q9H609 170 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
ZNF540-205ENST00000587220 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 SORBS3O60504 671 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 RFC2P35250 354 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 PBX2P40425 430 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 GNPTABQ3T906 1256 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 CREB3L3Q68CJ9 461 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 VSIG10LQ86VR7 867 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF540-205ENST00000587220 PPTC7Q8NI37 304 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 PBX4Q9BYU1 374 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 FTOQ9C0B1 505 aaKnown RBP eCLIP12.31□□□□□ -0.44
ZNF540-205ENST00000587220 MLXIPQ9HAP2 919 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
ZNF540-205ENST00000587220 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
ZNF540-205ENST00000587220 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
ZNF540-205ENST00000587220 SH2B2O14492 632 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-205ENST00000587220 GGPS1O95749 300 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 ZNF286BP0CG31 522 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 TGFB3P10600 412 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 GRIN2CQ14957 1233 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 IL31RAQ8NI17 732 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-205ENST00000587220 SPATA33Q96N06 139 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
ZNF540-205ENST00000587220 SLC28A3Q9HAS3 691 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms