RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 VTA1Q9NP79 307 aa15.84■□□□□ 0.13
TRAF4-215ENST00000584944 PCDHA6Q9UN73 950 aa15.84■□□□□ 0.13
TRAF4-215ENST00000584944 KCNJ14Q9UNX9 436 aa15.84■□□□□ 0.13
TRAF4-215ENST00000584944 PCDHA8Q9Y5H6 950 aa15.84■□□□□ 0.13
TRAF4-215ENST00000584944 MSCO60682 206 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-215ENST00000584944 NR3C2P08235 984 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 PDCP20941 246 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 GJB2P29033 226 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 KRT2P35908 639 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 GHRHRQ02643 423 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 ACVR2BQ13705 512 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 XRRA1Q6P2D8 792 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 C7orf61Q8IZ16 206 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 ANO3Q9BYT9 981 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 SPC25Q9HBM1 224 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 COL20A1Q9P218 1284 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 FAM184BQ9ULE4 1060 aa15.83■□□□□ 0.12
TRAF4-215ENST00000584944 SOX1O00570 391 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-215ENST00000584944 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
TRAF4-215ENST00000584944 STAM2O75886 525 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 RARBP10826 455 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 AKR1A1P14550 325 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 CCND3P30281 292 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-215ENST00000584944 BMP8BP34820 402 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
TRAF4-215ENST00000584944 PGM5Q15124 567 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 PRAMEF19Q5SWL8 479 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 LHX8Q68G74 356 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 SEPT14Q6ZU15 432 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 KRT25Q7Z3Z0 450 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 NLRX1Q86UT6 975 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 FBXO16Q8IX29 292 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-215ENST00000584944 PDCD2LQ9BRP1 358 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 TMEM260Q9NX78 707 aa15.82■□□□□ 0.12
TRAF4-215ENST00000584944 ZMYND8Q9ULU4 1186 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-215ENST00000584944 SEPT4O43236 478 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-215ENST00000584944 CYBAP13498 195 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 FDPSP14324 419 aaKnown RBP15.81■□□□□ 0.12
TRAF4-215ENST00000584944 GUCY1B3Q02153 619 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 ST3GAL1Q11201 340 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 PCNX4Q63HM2 1172 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 KRT40Q6A162 431 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 MCTP1Q6DN14 999 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 SCFD2Q8WU76 684 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 INTS4Q96HW7 963 aaKnown RBP15.81■□□□□ 0.12
TRAF4-215ENST00000584944 PHF20Q9BVI0 1012 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 MRVI1Q9Y6F6 885 aa15.81■□□□□ 0.12
TRAF4-215ENST00000584944 MMP1P03956 469 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 COL6A1P12109 1028 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 TNFAIP2Q03169 654 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 TTLL4Q14679 1199 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 NONOQ15233 471 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRAF4-215ENST00000584944 CCDC144BQ3MJ40 725 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 BRDTQ58F21 947 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-215ENST00000584944 LARP1BQ659C4 914 aaKnown RBP15.8■□□□□ 0.12
TRAF4-215ENST00000584944 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 DAGLBQ8NCG7 672 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 LRCH3Q96II8 777 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 CDHR1Q96JP9 859 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 FGD4Q96M96 766 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 TCEAL9Q9UHQ7 104 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 ZNFX1Q9P2E3 1918 aaKnown RBP15.8■□□□□ 0.12
TRAF4-215ENST00000584944 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
TRAF4-215ENST00000584944 TXNP10599 105 aaKnown RBP15.79■□□□□ 0.12
TRAF4-215ENST00000584944 EDNRBP24530 442 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 ARHGAP4P98171 946 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 CUL4AQ13619 759 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 IQSEC1Q6DN90 963 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 VSIG10LQ86VR7 867 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 DIS3L2Q8IYB7 885 aaKnown RBP15.79■□□□□ 0.12
TRAF4-215ENST00000584944 MORC4Q8TE76 937 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 WDR11Q9BZH6 1224 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 GJB4Q9NTQ9 266 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 RTEL1Q9NZ71 1219 aa15.79■□□□□ 0.12
TRAF4-215ENST00000584944 DDX20Q9UHI6 824 aaKnown RBP15.79■□□□□ 0.12
TRAF4-215ENST00000584944 DDX49Q9Y6V7 483 aaKnown RBP15.79■□□□□ 0.12
TRAF4-215ENST00000584944 SMCHD1A6NHR9 2005 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 ASTN1O14525 1302 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 MARCH6O60337 910 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 SYN1P17600 705 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 SREBF1P36956 1147 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 PIK3AP1Q6ZUJ8 805 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 ARRDC4Q8NCT1 418 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 FBXO18Q8NFZ0 1043 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 XPNPEP3Q9NQH7 507 aa15.78■□□□□ 0.12
TRAF4-215ENST00000584944 VPS37CA5D8V6 355 aaPredicted RBP15.77■□□□□ 0.12
TRAF4-215ENST00000584944 NKRFO15226 690 aaKnown RBP eCLIP15.77■□□□□ 0.121e-7■■□□□ 13.7
TRAF4-215ENST00000584944 FIBPO43427 364 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 IGHA2P01877 340 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 ZNF865P0CJ78 1059 aaPredicted RBP15.77■□□□□ 0.12
TRAF4-215ENST00000584944 ADCYAP1R1P41586 468 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 MAGEA10P43363 369 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms