RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 MCTP2Q6DN12 878 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 SEPT14Q6ZU15 432 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 REXO1Q8N1G1 1221 aaKnown RBP17.62■□□□□ 0.41
IFT20-208ENST00000578985 SCFD2Q8WU76 684 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 XPNPEP3Q9NQH7 507 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 MYH7BA7E2Y1 1941 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 ADCY6O43306 1168 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 SMPD1P17405 629 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 RGS19P49795 217 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 GALNT17Q6IS24 598 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 ARRDC4Q8NCT1 418 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 ZFP91Q96JP5 570 aaPredicted RBP17.61■□□□□ 0.41
IFT20-208ENST00000578985 PGBD1Q96JS3 809 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 ANO3Q9BYT9 981 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 PCDHA4Q9UN74 947 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 KCNJ14Q9UNX9 436 aa17.61■□□□□ 0.41
IFT20-208ENST00000578985 STAM2O75886 525 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 FARP2O94887 1054 aaPredicted RBP17.6■□□□□ 0.41
IFT20-208ENST00000578985 PGK1P00558 417 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
IFT20-208ENST00000578985 MRPS9P82933 396 aaKnown RBP17.6■□□□□ 0.41
IFT20-208ENST00000578985 HMGN5P82970 282 aaKnown RBP17.6■□□□□ 0.41
IFT20-208ENST00000578985 MLLT1Q03111 559 aaPredicted RBP17.6■□□□□ 0.41
IFT20-208ENST00000578985 TTLL4Q14679 1199 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 DUSP28Q4G0W2 176 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 BLIDQ8IZY5 108 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 DAGLBQ8NCG7 672 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 RASGRP4Q8TDF6 673 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 PHF20Q9BVI0 1012 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
IFT20-208ENST00000578985 GNEQ9Y223 722 aaKnown RBP17.6■□□□□ 0.41
IFT20-208ENST00000578985 SYNRGQ9UMZ2 1314 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 NKRFO15226 690 aaKnown RBP eCLIP17.59■□□□□ 0.41
IFT20-208ENST00000578985 RGS20O76081 388 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 TXNP10599 105 aaKnown RBP17.59■□□□□ 0.41
IFT20-208ENST00000578985 LRRC41Q15345 812 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 GJC2Q5T442 439 aaPredicted RBP17.59■□□□□ 0.41
IFT20-208ENST00000578985 AP5M1Q9H0R1 490 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 UPF3AQ9H1J1 476 aaKnown RBP17.59■□□□□ 0.41
IFT20-208ENST00000578985 SPC25Q9HBM1 224 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 RTEL1Q9NZ71 1219 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 Q9Y3F1 56 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
IFT20-208ENST00000578985 DYNC1LI2O43237 492 aaPredicted RBP17.58■□□□□ 0.4
IFT20-208ENST00000578985 ADAMTS4O75173 837 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 ARIH2O95376 493 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 PTGS1P23219 599 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 SREBF1P36956 1147 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.4
IFT20-208ENST00000578985 FOSBP53539 338 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 GJA9P57773 515 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 TRIM29Q14134 588 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 NPY5RQ15761 445 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 GNPTABQ3T906 1256 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 CCDC62Q6P9F0 684 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 KCNV1Q6PIU1 500 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 RNF180Q86T96 592 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 TLK2Q86UE8 772 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 FAM184AQ8NB25 1140 aa17.58■□□□□ 0.4
IFT20-208ENST00000578985 INPP4AQ96PE3 977 aaPredicted RBP17.58■□□□□ 0.4
IFT20-208ENST00000578985 KBTBD13C9JR72 458 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 DNM1LO00429 736 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 C6orf222P0C671 652 aaPredicted RBP17.57■□□□□ 0.4
IFT20-208ENST00000578985 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 LY6KQ17RY6 165 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 NLRX1Q86UT6 975 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 KLHDC9Q8NEP7 349 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 DIS3LQ8TF46 1054 aaKnown RBP17.57■□□□□ 0.4
IFT20-208ENST00000578985 COPS5Q92905 334 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 PCDH10Q9P2E7 1040 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 DDX41Q9UJV9 622 aaKnown RBP17.57■□□□□ 0.4
IFT20-208ENST00000578985 UBIAD1Q9Y5Z9 338 aa17.57■□□□□ 0.4
IFT20-208ENST00000578985 MYADML2A6NDP7 307 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 SPATA31C2B4DYI2 1134 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 M0R2N6 131 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 TGFB3P10600 412 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 ICAM3P32942 547 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 NKX3-2P78367 333 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
IFT20-208ENST00000578985 KRT40Q6A162 431 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 NECAB2Q7Z6G3 386 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 UBE2Q1Q7Z7E8 422 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 OR6J1Q8NGC5 347 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 PAWRQ96IZ0 340 aaKnown RBP17.56■□□□□ 0.4
IFT20-208ENST00000578985 C8orf76Q96K31 380 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 DOCK5Q9H7D0 1870 aa17.56■□□□□ 0.4
IFT20-208ENST00000578985 PDE4DIPQ5VU43 2346 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 CTAGE5O15320 804 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 FIBPO43427 364 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 GH1P01241 217 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 CYP3A4P08684 503 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 ITGB5P18084 799 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 CST5P28325 142 aaPredicted RBP17.55■□□□□ 0.4
IFT20-208ENST00000578985 KRT2P35908 639 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 ZNF76P36508 570 aa17.55■□□□□ 0.4
IFT20-208ENST00000578985 CUL4AQ13619 759 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms