RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
PSMD11-207ENST00000578397 MTIF3Q9H2K0 278 aaKnown RBP16.17■□□□□ 0.18
PSMD11-207ENST00000578397 LAMA2P24043 3122 aaKnown RBP16.17■□□□□ 0.18
PSMD11-207ENST00000578397 CYTH3O43739 400 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 ACRP10323 421 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 LY6KQ17RY6 165 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 HERVK_113Q902F9 699 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 EMID1Q96A84 441 aaPredicted RBP16.16■□□□□ 0.18
PSMD11-207ENST00000578397 UMODL1Q5DID0 1318 aa16.16■□□□□ 0.18
PSMD11-207ENST00000578397 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 DDAH1O94760 285 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 FGBP02675 491 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 SMARCA1P28370 1054 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 KIF5BP33176 963 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 MCM5P33992 734 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 CCL23P55773 120 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 ARHGAP1Q07960 439 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 FAM47CQ5HY64 1035 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 KCNV1Q6PIU1 500 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 RPUSD2Q8IZ73 545 aaKnown RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 TMEM87BQ96K49 555 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 PDCD2LQ9BRP1 358 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 WNT8AQ9H1J5 351 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 TTYH1Q9H313 450 aaPredicted RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 LY9Q9HBG7 655 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 TRMT13Q9NUP7 481 aaKnown RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 DDX41Q9UJV9 622 aaKnown RBP16.15■□□□□ 0.18
PSMD11-207ENST00000578397 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
PSMD11-207ENST00000578397 COL6A3P12111 3177 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 SLC27A2O14975 620 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 PRC1O43663 620 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 MMP3P08254 477 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 CYP2C9P11712 490 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
PSMD11-207ENST00000578397 DNAJB2P25686 324 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 GNAQP50148 359 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 LAMC2Q13753 1193 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 VSIG10LQ86VR7 867 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 ZNF654Q8IZM8 581 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 LZTS2Q9BRK4 669 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 SPZ1Q9BXG8 430 aa16.14■□□□□ 0.17
PSMD11-207ENST00000578397 PFKMP08237 780 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 TGFB3P10600 412 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
PSMD11-207ENST00000578397 HOXA13P31271 388 aaPredicted RBP16.13■□□□□ 0.17
PSMD11-207ENST00000578397 LIFRP42702 1097 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 NECTIN1Q15223 517 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 DGKDQ16760 1214 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 CREB3L3Q68CJ9 461 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 SESTD1Q86VW0 696 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 TIFAQ96CG3 184 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 ANO2Q9NQ90 1003 aa16.13■□□□□ 0.17
PSMD11-207ENST00000578397 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
PSMD11-207ENST00000578397 CALM1P0DP23 149 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 CALM2P0DP24 149 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 CALM3P0DP25 149 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 CCND2P30279 289 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 PGM5Q15124 567 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 DHX37Q8IY37 1157 aaKnown RBP16.12■□□□□ 0.17
PSMD11-207ENST00000578397 PPTC7Q8NI37 304 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 RRP36Q96EU6 259 aaKnown RBP16.12■□□□□ 0.17
PSMD11-207ENST00000578397 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 SCN10AQ9Y5Y9 1956 aa16.12■□□□□ 0.17
PSMD11-207ENST00000578397 GALR2O43603 387 aaPredicted RBP16.11■□□□□ 0.17
PSMD11-207ENST00000578397 RGS20O76081 388 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 RFC2P35250 354 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 BFSP2Q13515 415 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 OTOP2Q7RTS6 562 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 FCHSD1Q86WN1 690 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 RETREG2Q8NC44 543 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 SCLYQ96I15 445 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 KATNAL1Q9BW62 490 aa16.11■□□□□ 0.17
PSMD11-207ENST00000578397 SEC63Q9UGP8 760 aaKnown RBP16.11■□□□□ 0.17
PSMD11-207ENST00000578397 PPFIA4O75335 1185 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 STAM2O75886 525 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 RAB30Q15771 203 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 CELF3Q5SZQ8 465 aaKnown RBP16.1■□□□□ 0.17
PSMD11-207ENST00000578397 MYSM1Q5VVJ2 828 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 IL31RAQ8NI17 732 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 MYLIPQ8WY64 445 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 KAT2BQ92831 832 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 VWCEQ96DN2 955 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 PBX4Q9BYU1 374 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 ZNF576Q9H609 170 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
PSMD11-207ENST00000578397 MSRAQ9UJ68 235 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
PSMD11-207ENST00000578397 MYH6P13533 1939 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms