RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 ZMYND12Q9H0C1 365 aa20.78■□□□□ 0.92
PFN1-202ENST00000572383 PCDH10Q9P2E7 1040 aa20.78■□□□□ 0.92
PFN1-202ENST00000572383 LAMA3Q16787 3333 aa20.78■□□□□ 0.92
PFN1-202ENST00000572383 FRMPD4Q14CM0 1322 aa20.78■□□□□ 0.92
PFN1-202ENST00000572383 ESYT2A0FGR8 921 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 JAK2O60674 1132 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 TNFAIP2Q03169 654 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 LRRC26Q2I0M4 334 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 GJC2Q5T442 439 aaPredicted RBP20.77■□□□□ 0.92
PFN1-202ENST00000572383 VSIG10LQ86VR7 867 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 IL27Q8NEV9 243 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 XPNPEP3Q9NQH7 507 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 SH3GLB2Q9NR46 395 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 TMEM260Q9NX78 707 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
PFN1-202ENST00000572383 PCDHA6Q9UN73 950 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 PCDHA8Q9Y5H6 950 aa20.77■□□□□ 0.92
PFN1-202ENST00000572383 A0A1W2PPC1 479 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 RBM47A0AV96 593 aaKnown RBP20.76■□□□□ 0.91
PFN1-202ENST00000572383 SPDYE3A6NKU9 549 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 EIF3JO75822 258 aaKnown RBP20.76■□□□□ 0.91
PFN1-202ENST00000572383 FDPSP14324 419 aaKnown RBP20.76■□□□□ 0.91
PFN1-202ENST00000572383 SMPD1P17405 629 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 PTGS1P23219 599 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 CCND2P30279 289 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 CLK2P49760 499 aaKnown RBP20.76■□□□□ 0.91
PFN1-202ENST00000572383 IQSEC1Q6DN90 963 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 PGBD1Q96JS3 809 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 GLT8D2Q9H1C3 349 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 C6orf50Q9HD87 102 aa20.76■□□□□ 0.91
PFN1-202ENST00000572383 SH2B1Q9NRF2 756 aaPredicted RBP20.76■□□□□ 0.91
PFN1-202ENST00000572383 DUSP11O75319 330 aaKnown RBP20.75■□□□□ 0.91
PFN1-202ENST00000572383 PGK1P00558 417 aa20.75■□□□□ 0.91
PFN1-202ENST00000572383 MYCNP04198 464 aaPredicted RBP20.75■□□□□ 0.91
PFN1-202ENST00000572383 LRRC41Q15345 812 aa20.75■□□□□ 0.91
PFN1-202ENST00000572383 WDR11Q9BZH6 1224 aa20.75■□□□□ 0.91
PFN1-202ENST00000572383 ZMYND8Q9ULU4 1186 aaPredicted RBP20.75■□□□□ 0.91
PFN1-202ENST00000572383 GNEQ9Y223 722 aaKnown RBP20.75■□□□□ 0.91
PFN1-202ENST00000572383 SYNRGQ9UMZ2 1314 aa20.75■□□□□ 0.91
PFN1-202ENST00000572383 RGS20O76081 388 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 ARIH2O95376 493 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 GNA11P29992 359 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 NLRP5P59047 1200 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 IRX5P78411 483 aaPredicted RBP20.74■□□□□ 0.91
PFN1-202ENST00000572383 MRPS9P82933 396 aaKnown RBP20.74■□□□□ 0.91
PFN1-202ENST00000572383 JAKMIP3Q5VZ66 844 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 TEX2Q8IWB9 1127 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 SCFD2Q8WU76 684 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 GJB4Q9NTQ9 266 aa20.74■□□□□ 0.91
PFN1-202ENST00000572383 ADAMTS4O75173 837 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 FOSP01100 380 aaPredicted RBP20.73■□□□□ 0.91
PFN1-202ENST00000572383 SYN1P17600 705 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 DUSP28Q4G0W2 176 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 PCNX4Q63HM2 1172 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 RNF180Q86T96 592 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 TMX3Q96JJ7 454 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 GDF15Q99988 308 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 ALG1Q9BT22 464 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 ANO3Q9BYT9 981 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 RTEL1Q9NZ71 1219 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 KCNJ14Q9UNX9 436 aa20.73■□□□□ 0.91
PFN1-202ENST00000572383 MYADML2A6NDP7 307 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 TXNP10599 105 aaKnown RBP20.72■□□□□ 0.91
PFN1-202ENST00000572383 BMP8BP34820 402 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 MCM2P49736 904 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 ATN1P54259 1190 aaPredicted RBP20.72■□□□□ 0.91
PFN1-202ENST00000572383 GJA9P57773 515 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 AP3B2Q13367 1082 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 TLK2Q86UE8 772 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 REXO1Q8N1G1 1221 aaKnown RBP20.72■□□□□ 0.91
PFN1-202ENST00000572383 BICD2Q8TD16 824 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 RASGRP4Q8TDF6 673 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 WASF1Q92558 559 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 LLPHQ9BRT6 129 aaKnown RBP20.72■□□□□ 0.91
PFN1-202ENST00000572383 EHMT1Q9H9B1 1298 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 PHF24Q9UPV7 400 aa20.72■□□□□ 0.91
PFN1-202ENST00000572383 DYNC1LI2O43237 492 aaPredicted RBP20.71■□□□□ 0.91
PFN1-202ENST00000572383 TTLL4Q14679 1199 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 NPY5RQ15761 445 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 LY6KQ17RY6 165 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 CCDC62Q6P9F0 684 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 SLC39A5Q6ZMH5 540 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 COPS5Q92905 334 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 PHF20Q9BVI0 1012 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 UPF3AQ9H1J1 476 aaKnown RBP20.71■□□□□ 0.91
PFN1-202ENST00000572383 PCDHA4Q9UN74 947 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 MRVI1Q9Y6F6 885 aa20.71■□□□□ 0.91
PFN1-202ENST00000572383 KIAA1217Q5T5P2 1943 aa20.7■□□□□ 0.91
PFN1-202ENST00000572383 CTAGE5O15320 804 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 STAM2O75886 525 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 C6orf222P0C671 652 aaPredicted RBP20.7■□□□□ 0.9
PFN1-202ENST00000572383 XBP1P17861 261 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 RTP1P59025 263 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 SNX17Q15036 470 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 C1orf53Q5VUE5 145 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 XRRA1Q6P2D8 792 aa20.7■□□□□ 0.9
PFN1-202ENST00000572383 FAM177A1Q8N128 213 aaPredicted RBP20.7■□□□□ 0.9
PFN1-202ENST00000572383 KLHDC9Q8NEP7 349 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms