RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 MANSC4A6NHS7 340 aaPredicted RBP19.51■□□□□ 0.71
RPAIN-208ENST00000571043 CDC25AP30304 524 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 IKQ13123 557 aaPredicted RBP19.51■□□□□ 0.71
RPAIN-208ENST00000571043 COG2Q14746 738 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 CCL15Q16663 113 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 CABP7Q86V35 215 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 MTRQ99707 1265 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 FBXO28Q9NVF7 368 aa19.51■□□□□ 0.71
RPAIN-208ENST00000571043 PP2D1A8MPX8 630 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 PTGS1P23219 599 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 USP11P51784 963 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 INHBEP58166 350 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 FANCCQ00597 558 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 PDIA5Q14554 519 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 TMEM266Q2M3C6 531 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 NAALADL2Q58DX5 795 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 CYP4F22Q6NT55 531 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 RASSF8Q8NHQ8 419 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 RAB34Q9BZG1 259 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 KCNF1Q9H3M0 494 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 PRR12Q9ULL5 1215 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 SLC45A1Q9Y2W3 748 aa19.5■□□□□ 0.71
RPAIN-208ENST00000571043 SMCHD1A6NHR9 2005 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 CBFA2T2O43439 604 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 FLOT1O75955 427 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 TDP2O95551 362 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 PABPC4Q13310 644 aaKnown RBP eCLIP19.49■□□□□ 0.711e-6■■■■□ 26.3
RPAIN-208ENST00000571043 MOXD1Q6UVY6 613 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 PTPN18Q99952 460 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 SLF1Q9BQI6 1058 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 KBTBD4Q9NVX7 518 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 HOXC10Q9NYD6 342 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 IFNKQ9P0W0 207 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 IMPACTQ9P2X3 320 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 PPP1R9AQ9ULJ8 1098 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 ADAMTS5Q9UNA0 930 aa19.49■□□□□ 0.71
RPAIN-208ENST00000571043 BTBD19C9JJ37 291 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 SLC37A4O43826 429 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 FOSP01100 380 aaPredicted RBP19.48■□□□□ 0.71
RPAIN-208ENST00000571043 DSG3P32926 999 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 TECP42680 631 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 CUL4BQ13620 913 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 DHX8Q14562 1220 aaKnown RBP19.48■□□□□ 0.71
RPAIN-208ENST00000571043 ANKRD23Q86SG2 305 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 KIFC2Q96AC6 838 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 XPO4Q9C0E2 1151 aaKnown RBP19.48■□□□□ 0.71
RPAIN-208ENST00000571043 FANCLQ9NW38 375 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 DDX25Q9UHL0 483 aaKnown RBP19.48■□□□□ 0.71
RPAIN-208ENST00000571043 NRBP1Q9UHY1 535 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 MYPNQ86TC9 1320 aa19.48■□□□□ 0.71
RPAIN-208ENST00000571043 CYP3A7-CYP3A51PA0A087WV96 503 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 MEIS2O14770 477 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 RPN1P04843 607 aaKnown RBP19.47■□□□□ 0.71
RPAIN-208ENST00000571043 FDX1P10109 184 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 CYP3A7P24462 503 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 CASP1P29466 404 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 TXKP42681 527 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 USP17L6PQ6QN14 398 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 PAXIP1Q6ZW49 1069 aaPredicted RBP19.47■□□□□ 0.71
RPAIN-208ENST00000571043 STAMQ92783 540 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 ANO3Q9BYT9 981 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 BLZF1Q9H2G9 400 aa19.47■□□□□ 0.71
RPAIN-208ENST00000571043 PPP1R3GB7ZBB8 358 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 ZNF18P17022 549 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 TM4SF4P48230 202 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 GSDMDP57764 484 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 NOGQ13253 232 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 KCNB1Q14721 858 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 CCDC144BQ3MJ40 725 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 CALML4Q96GE6 196 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 CAPNS2Q96L46 248 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 MBOAT7Q96N66 472 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 P2RX7Q99572 595 aaKnown RBP19.46■□□□□ 0.71
RPAIN-208ENST00000571043 ASCC2Q9H1I8 757 aaPredicted RBP19.46■□□□□ 0.71
RPAIN-208ENST00000571043 LRWD1Q9UFC0 647 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 NFE2L3Q9Y4A8 694 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 COL11A1P12107 1806 aaPredicted RBP19.46■□□□□ 0.71
RPAIN-208ENST00000571043 SERPINC1P01008 464 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 ATP1A3P13637 1013 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 PLCG1P19174 1290 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 OSBPP22059 807 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 C1QTNF8P60827 252 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 ZNF658Q5TYW1 1059 aaPredicted RBP19.46■□□□□ 0.71
RPAIN-208ENST00000571043 SPATA1Q5VX52 437 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 CRYGNQ8WXF5 182 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 ZIC5Q96T25 663 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 MMTAG2Q9BU76 263 aaKnown RBP19.46■□□□□ 0.71
RPAIN-208ENST00000571043 RANBP17Q9H2T7 1088 aaKnown RBP19.46■□□□□ 0.71
RPAIN-208ENST00000571043 SLC38A10Q9HBR0 1119 aa19.46■□□□□ 0.71
RPAIN-208ENST00000571043 SPDYE16A6NNV3 312 aaPredicted RBP19.45■□□□□ 0.7
RPAIN-208ENST00000571043 PIK3CDO00329 1044 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 PDHXO00330 501 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 VWA5AO00534 786 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 SLC26A4O43511 780 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 CD44P16070 742 aaKnown RBP19.45■□□□□ 0.7
RPAIN-208ENST00000571043 UBASH3AP57075 661 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 SNAP25P60880 206 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 IRX3P78415 501 aaPredicted RBP19.45■□□□□ 0.7
RPAIN-208ENST00000571043 SREBF2Q12772 1141 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms